Desulforapulum autotrophicum: HRM2_35960
Help
Entry
HRM2_35960 CDS
T00861
Symbol
hemD
Name
(GenBank) HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat00860
Porphyrin metabolism
dat01100
Metabolic pathways
dat01110
Biosynthesis of secondary metabolites
dat01120
Microbial metabolism in diverse environments
dat01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HRM2_35960 (hemD)
Enzymes [BR:
dat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
HRM2_35960 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
HRM2_35960 (hemD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ACN16661
UniProt:
C0Q9U3
LinkDB
All DBs
Position
4058834..4060375
Genome browser
AA seq
513 aa
AA seq
DB search
METNKGKVYLIGAGPGDPGLLTIKGMETIQRADVVVYDYLAAPALLSYARPDAEIIYVGK
KGGDHTLTQDKISDLLADLGKKGKIVARLKGGDPFIFGRGGEEAEVLIDAGVEFEIIPGV
TSAIAAPAYAGIPLTHREHASSVSIITGHEDPLKQESSIQWDCLARSNATLVFLMGVKNL
SSITGNLIKAGKSGNTPVALVRWGTTALQQTVTGTLDTIVADVEKAGLKSPAIIVVGSVV
TLREKMNWFESRPLLGKTIVVTRARVQASELVGSLSALGARCIEIPTIQVVPPRDPAPLV
NAVKNLSDFDWVVFTSVNGVKLFFKTLYGEQMDVRALGGLKFACIGPATKAELFVHGIVS
DILPKTYMAESVVEAFSNVEIQGKRVLLPRAKQARTILPEELDKLGARVTEVTAYETIAE
HLDEAELARLVAESKVDIVTFTSSSTVENFKRLVMDKKVLEMGPEVIAACIGPITAETAA
SLGIRPDIVATEFTIPGLVDAIVAHVKNQRCTQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaacaaaggcaaagtatatctgatcggtgcaggtcccggagatcctggtctc
ctgaccatcaagggcatggaaaccatccagcgggcagatgtggtcgtctacgactacctg
gcagccccagcccttttatcctacgcaagacccgacgctgagatcatatacgtgggcaaa
aagggaggagaccacaccctgacccaggacaaaatcagcgatctgcttgcagacctgggc
aaaaagggaaaaattgttgcaagactcaaggggggggatcccttcatctttggccggggt
ggtgaagaggcagaggttctcattgatgcaggggttgaatttgagatcatcccgggcgtc
acgtctgccattgcagctccggcctatgccggcatccccctgacccacagggaacacgcc
tcgtcggtatcgatcattaccggccatgaggaccccctgaagcaggagagcagcatacaa
tgggactgccttgcccgaagcaatgccaccctggtctttctcatgggggtcaagaacctc
tccagcatcacgggtaacctcatcaaggccggcaagagcggcaatacccctgtggccctt
gtccgctggggaacaacagcccttcagcagaccgtgacaggcacccttgataccattgtc
gccgatgttgaaaaagctggattgaaatcgcctgccatcattgttgtgggcagcgtggta
accctcagggaaaaaatgaactggtttgaatcccgaccgttgcttggcaaaaccattgtc
gttacccgggcaagggtacaggcaagtgagcttgtgggaagcctgtccgcccttggggcc
aggtgcatagagatccccaccattcaggtggtgcctcccagagatccggctcccctggtc
aatgccgtcaaaaacctgtccgattttgactgggtggtattcacctctgtcaacggggta
aaactgttctttaaaaccctgtatggcgagcagatggatgtgcgtgccctgggagggctt
aaatttgcctgcatcggtcctgcaaccaaggcagaactttttgtccacggaattgtttca
gatatccttcccaaaacctacatggccgaatcggttgtggaggcattttcaaatgtcgaa
attcaggggaaacgggtgcttctgccaagggcaaaacaggcacgaaccatccttcctgaa
gaactcgataaattaggtgcccgggtaacggaagtaacggcctatgaaaccatcgcagaa
catttggatgaggctgaacttgcaaggctcgttgccgagtcaaaggtggatatagtcacc
tttacaagctcatcaacggtcgaaaacttcaagcgtcttgtaatggacaaaaaagtcctt
gaaatgggaccggaggtcattgccgcctgcattggccccattactgccgaaacggcagcc
tccctgggaatcaggcctgacatcgtcgcaaccgagtttacgattccagggcttgtggat
gccattgttgcccatgttaaaaaccaaaggtgcacccaatga
DBGET
integrated database retrieval system