Desulforapulum autotrophicum: HRM2_37680
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Entry
HRM2_37680 CDS
T00861
Symbol
dapF
Name
(GenBank) DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat00300
Lysine biosynthesis
dat00470
D-Amino acid metabolism
dat01100
Metabolic pathways
dat01110
Biosynthesis of secondary metabolites
dat01120
Microbial metabolism in diverse environments
dat01230
Biosynthesis of amino acids
Module
dat_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HRM2_37680 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HRM2_37680 (dapF)
Enzymes [BR:
dat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HRM2_37680 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
CBM_20
Motif
Other DBs
NCBI-ProteinID:
ACN16826
UniProt:
C0QAP3
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All DBs
Position
4230555..4231406
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AA seq
283 aa
AA seq
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MELNFTKMEGLGNDFVMLDDRNGAIVQTVPYPVLAKKLCSRRFGVGGDGIIIIIDSETAD
VGFKIFNPDGSEPEMCGNGMRCFAKLVFEQGIVTKQRFTVETLAGTIIPEILLSDTRQVE
AICVDMGEPILEPDRIPFKCNRQRAVNEQIQVKGETVSITAVSMGNPHAVIFVDDVKKID
LENLGRAIETHELFPAKTNVEFVTVLNDQELVMRVWERGAGETLACGTGASAVLVAASLN
GLTRETALVHLAGGDLSIHWDQQSNHLFKTGPATHVFTGRIKI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaacttcaccaaaatggagggtctcggaaacgactttgtcatgctcgacgac
aggaacggggccattgttcagacagtgccctatcccgtgcttgcgaaaaaactctgttca
cgccgattcggtgtcggcggtgacggcattatcatcatcattgattccgaaacagcggat
gtgggtttcaaaatcttcaaccccgacggatcagaaccggaaatgtgcggcaacggcatg
cgctgctttgcaaaacttgtgtttgaacaaggaatcgtcaccaaacagcgtttcacagtt
gaaacccttgccggaaccatcattccagaaattctactctcagatacccgtcaggttgaa
gccatatgcgtggacatgggagagccgatccttgaacccgaccgaattccttttaaatgc
aaccgacaacgggccgttaatgagcagatccaggtcaagggagaaacagtttccattacg
gccgtatccatgggcaatccccatgccgttatatttgtagatgatgtcaaaaaaatcgac
cttgagaacctgggcagggcaatcgagacccatgaactatttcctgcaaaaaccaatgtg
gaatttgtaacggtcctcaacgatcaagaacttgtgatgcgggtatgggagcggggagcc
ggcgaaaccctggcctgcgggacaggtgcctcggcagtccttgtggcggcctcgctcaac
ggactcacccgggaaacagccctggttcaccttgctggaggcgatctttccatccactgg
gatcagcagagcaaccatctttttaagaccggtcctgccacccatgtctttaccggcaga
atcaagatctga
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