Desulforapulum autotrophicum: HRM2_39600
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Entry
HRM2_39600 CDS
T00861
Name
(GenBank) DNA deoxyribo-dipyrimidine photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dat
Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dat03400
]
HRM2_39600
Enzymes [BR:
dat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HRM2_39600
DNA repair and recombination proteins [BR:
dat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HRM2_39600
Prokaryotic type
HRM2_39600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
GH115_C
Motif
Other DBs
NCBI-ProteinID:
ACN17018
UniProt:
C0QBL6
LinkDB
All DBs
Position
complement(4448895..4450256)
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AA seq
453 aa
AA seq
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MQLKNRIKKLNRARVISGEYVLYWMQQAQRAEENHALEYAIYQANQQDKMVVVVFSLTND
SPDANLRHYTFMLEGLNETRKSLEKRGIRMIFRIGHPVKEVLDIGRKASMIVCDRGYLRH
QRAWRKAIAEKSGCPVVQVETDVVIPVEQVSDKAEYAAYTIRPKISRQLDQYLTPIEHIE
LRNPSLEIALKSTELERIKTVLKDLNVDDSIQPVSHIFRGGTSEAKARFDVFLDQHFSRY
AVHRNEPKYLAVSCMSPYLHFGQISPLYLALKIKACKNEAQEAAAAYLEELIVRRELAAN
FVYFNPYYDSLGCLPAWPTKTLAEHEKDVRDPVYTKSQLIACRTHDEYWNAAMKEMIVTG
FMHNYMRMYWGKKILEWSPTPLRAYETMIDLNNAYFLDGRDPNSYAGVGWIFGLHDRAWF
ERPIFGKVRYMAASGLERKCDIKGYVDRVKFLI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcagttaaaaaaccggataaaaaagctgaatcgtgcacgtgtaattagcggtgaatat
gtgttgtattggatgcagcaggctcagagggccgaagaaaaccatgccttggaatacgct
atatatcaagccaatcagcaagataaaatggtggtggtggttttcagtttgacaaacgac
tctccggacgccaatttgagacattacacatttatgcttgaagggttgaatgaaacgaga
aagagccttgaaaaaaggggaatccggatgattttcaggatcggacacccggttaaagag
gttctggatattggacgaaaggcgtccatgatcgtttgtgaccgagggtatttacgtcat
caaagggcctggcggaaggccatagcagaaaaatcaggctgccctgttgttcaggtcgaa
acagatgttgtgattcctgttgaacaggtatctgataaggcagaatatgcggcctatacc
atacggccgaaaatcagccgacagctggatcaatatctcacacccatcgaacatattgaa
ttgcggaatccgtctcttgaaattgctttaaaaagtacagaattggagcgtataaaaacc
gttttgaaggatttgaatgttgatgacagtatccagccggtttcccacattttcaggggg
ggaacatctgaagcaaaggctcgatttgacgtgtttttagaccagcacttctcaagatat
gcggtgcatcgaaatgagcctaaatatctggctgtctcctgcatgagcccgtatcttcat
ttcggccagatttcacctttgtatctggcgcttaaaataaaagcatgtaaaaatgaagct
caagaagctgcggcagcatacctggaagaactgattgtcagaagagagctggcagccaat
tttgtttattttaatccgtattatgattctttgggctgccttcccgcatggccgacaaag
acgctggcagagcatgaaaaagatgtgcgtgaccctgtctatacaaaatcacagcttatc
gcatgtcgcacccatgatgaatattggaatgccgccatgaaggaaatgatcgttacaggt
ttcatgcataattatatgagaatgtattggggcaaaaagattttagaatggagccccaca
cctctccgggcttatgaaacaatgatagaccttaataacgcctattttctggatggcaga
gaccccaattcctatgccggggttggctggattttcggcctgcatgatcgggcctggttt
gaaaggcccatattcggtaaggtccgatatatggcagcgtccgggcttgaaaggaaatgt
gatattaaaggatatgtagacagggtgaaatttttaatttga
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