Desulforapulum autotrophicum: HRM2_40500
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Entry
HRM2_40500 CDS
T00861
Symbol
rapA
Name
(GenBank) RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
dat
Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dat03021
]
HRM2_40500 (rapA)
Transcription machinery [BR:
dat03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HRM2_40500 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
SNF2-rel_dom
Tudor_1_RapA
Helicase_C
Tudor_RapA
ResIII
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACN17108
UniProt:
C0QC91
LinkDB
All DBs
Position
complement(4554418..4557135)
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AA seq
905 aa
AA seq
DB search
MMQLKKGQRFTSEMEPELGLGVLVTSDSRTLTVNFAASNCVRRYTTAAAPLRRVRFEVGD
TIVFGDNRTMVIETVDNRDGLLVYGGAGECVPEQDLADTMSLSAPRDRLWAGIFDPADTF
DLRFEANRLRHAHETSPAMGFMGGRVDLIPHQFYIAGEVSNRYLPRILLADETGLGKTIE
ACLVLHRLLLSERISRVLILVPESLVHQWFIELYRRFNLVFRIFDPELCRELERSEPGQN
PFFSEQLVICCLDGMAADETSRIQLVQAGWDMVVVDEAHHLEEGGAAYSLVEALATAQAG
MMLLSATPEQLGRRNHFSHLRLLDPDRYTNFDDYLEESRQYRQTAETLENLADPGEDSQE
ITALLDSHGPGRAVFRNTRAVIKGFPQRSGVLYPLVPKTDTTVALGRCDAPVASLSMADD
DPGVFFAKIEWLKGLLKSLKREKVLLICATSEKAAAIETALATLITMKIARFTQDMTLVQ
RDRSAAWFAEPLGAELMICSEIGSEGRNFQFAHHLVMFDLPDNPELVEQRIGRLDRIGQH
HPIVIHVPYAHDSRQAVLARWYREGTGIFENNISGIHQIHRQFAARLADLSDLCDQAGQV
PYGALDQLIADTRTFAAETSKRLKSGRDKLLELNSFRPRKAEQLVKTICETDQDQSIDLF
MAKIFKFYAISPEPIMARTFRLEVFNSAGVPFPGFKGDGMIVTFDRTVAVTRDDIVFLTW
DHPMVTGAMELFLGSDHGNAAIAEVNGTGKFEILLESVYTLECVAPRALHMNRFLARTPI
RTLVDHNLTNLSQDRSWALTAASLSTPARSWLGQFPEIKEQLLPELLAAGRRFSEQAAAR
VISRAKAAVEKVVGGEAARLERLKRINPAIREDEIRRAKDEATTLVIHIDQARLRLDSLR
LIKVS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaattgaaaaaaggccagcgctttaccagcgaaatggaaccggaactggggctt
ggcgtccttgttaccagtgattcaagaaccctgactgtcaactttgcggcaagcaactgt
gtgcgccgctacaccactgctgccgcccccttaaggcgggtccggtttgaggtgggagat
accattgtgtttggcgacaatcgtaccatggtcattgaaaccgtggacaacagggacggg
ctcctggtgtatggtggcgcaggagagtgcgtgcccgagcaggaccttgccgataccatg
agtctgtctgcccccagggaccgtttgtgggccggcatatttgacccggccgataccttt
gatctgcggtttgaggcaaaccgcctcaggcacgcccatgaaacctccccggccatgggg
ttcatgggcgggcgggtggacctgatcccccaccagttttacattgccggggaggtgtca
aaccggtaccttccccggatcctccttgcagatgagaccggccttggcaagaccatcgag
gcctgccttgttctccaccgactgctcttgagcgaacgcatctcccgggtattgatcctg
gtgcctgaatccctggttcaccagtggtttatcgaactctaccggcggttcaaccttgtt
ttcagaatttttgacccggagctgtgcagggagctggaacggtctgagcccgggcagaat
ccttttttctcagagcagctcgtcatctgttgccttgatgggatggcagcggatgaaacg
agccgcattcagcttgttcaggccgggtgggatatggtcgtggtggatgaagcccaccac
ctggaagaggggggggccgcctacagccttgttgaggccctggccacggcccaggccggg
atgatgcttttgagtgccactcccgagcagctgggccggcgaaatcatttttcccacctg
cggctgcttgacccggatcggtacacaaactttgacgattatcttgaggagagccgtcag
taccggcagacggcagagacccttgaaaaccttgcagatcctggggaggattcccaggag
ataacggccctgctcgacagccacgggccgggccgggctgtgttcaggaacacccgggct
gtcatcaaaggatttccgcaacgaagtggggtgctgtatcctctggttccgaaaaccgat
acaaccgttgccctgggccggtgtgacgcccctgttgcctctttgtccatggcagatgac
gacccgggtgtcttttttgctaaaatagagtggctgaagggactgttaaaatccctgaaa
cgggaaaaagtgcttttgatctgcgccacctctgaaaaggccgccgccattgagacagca
cttgccaccctcatcaccatgaagatcgccaggtttacccaggacatgaccctggttcag
cgggaccggagcgcagcatggtttgcagaacccctgggtgctgaactcatgatttgttcg
gagattggcagtgaaggacgaaatttccagtttgcccatcaccttgtgatgtttgatctt
ccggataaccccgaacttgtggagcagcgcatcggacggctggaccgcatcgggcagcat
caccccatcgtgatccatgttccctatgcccatgacagccgtcaggcagtcctggcaagg
tggtaccgggaggggacggggatctttgaaaacaacatcagtggcatccaccagatccac
aggcagtttgcagcccggcttgccgacctgtcagatctttgtgatcaggcaggccaggtc
ccctatggtgccctggaccagctcattgctgatacccgcacctttgccgccgagacctcg
aaacggctcaaatccggcagggacaagcttcttgaactcaattcattcaggccccgaaag
gctgaacaactggtcaagaccatctgtgaaacagaccaggaccagtccattgatcttttc
atggcaaaaatatttaaattctacgccatctccccggaacccatcatggcgcgaaccttt
cgcctggaagtttttaattccgcaggggttccgttcccgggtttcaagggtgacggcatg
atcgtgacctttgatagaacggttgccgtgacccgggatgatattgtttttctgacctgg
gatcatcccatggtgaccggggccatggagctgttccttggcagtgaccatggaaacgca
gccattgctgaagtcaatgggaccggcaaatttgagattctcctggagtctgtttacacc
cttgaatgtgttgcacccagagcccttcacatgaaccgattccttgcccgaacccccatc
cggaccctggtggaccacaatctgacgaatttgagtcaggatcgttcctgggcgttaact
gctgcatctctttcaacccctgcccggtcctggctcgggcaatttcctgaaatcaaggaa
cagctgcttccagaacttctggccgccgggcgaaggttttctgaacaggcggcagcccgg
gtcatctccagggcaaaggccgcggttgaaaaggttgtgggcggcgaggcagcgaggctt
gaacgactcaaacggatcaatccggccatacgggaggatgagattcgcagggcaaaagat
gaggcaacgacactcgtgattcacattgatcaggcaaggttgaggctggattctttaaga
ttgatcaaggtgagttaa
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