Desulforapulum autotrophicum: HRM2_46060
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Entry
HRM2_46060 CDS
T00861
Name
(GenBank) hypothetical outer membrane protein
Organism
dat
Desulforapulum autotrophicum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
ACN17662
UniProt:
C0QG83
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Position
complement(5183630..5187550)
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AA seq
1306 aa
AA seq
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MIKKNNIVSDKHISIKEIKSIRTLKGLDEMQLKSLEATGIQTVLDLATSVIFRTATTLLR
LSQNPQSDASNIAFLLDPNYTNRPLNDCMQWPVSSIKGVGKVQQEAMEKAGMLTVADLAQ
FPGYHEATKILGYYRRDEDPDTVFFEPPSAPQSLLPDIVGATDSSARFSHFVTERDIRDA
LILVDNQCGPISPVSRIFTENHCPLISLGYVSMLRQTWTNVGTSLGEVVHSLALAPGESR
NIVTIDWKRTHLSVRDEKTKVTEQVNSVQVHKRALDEVVRTVAEEHQAGSTQTAAANAAT
AGSFVAAGAVVGGIGGGVAGAVTGLVAGNVANVAGGTPTIAGAGVGAAVGAGAGAIAGSV
IGTGAVALGSIESDSSGNREIIGKNQQRITQATQQKSSAIRSLWSSIVLENQEAEQSHVV
TTTVTNYNHMHALTVQYYEVMQHYCVTMSLDDIEPLLFLPFKPLSFGLEDIEQFWPILRD
AVEDDFLVSRLDEAFGLDGFIVPPVTPFDPDAAISDRITLEIQDRDWNPSFPMEPKIIKK
NGTRVALSIINSSIRTLRVNGQNVVQLRYRTYEDIQIADIEKVVVERLAAAVDSRITVRI
RTKIKETINGELITAVTPFQSLGTKTIPSFSPGGKPAAEFNWRIADNLNDVFEDFKEMIR
EQQNALLQITTIVQRQPYFYTKVLLQSLEAGELIDVLSSLKLKINDSEIHLNDLVHVVPV
GITANSMVFKMKNAAALVLQGKSDPFRDMKLYAKELATFLARQVNLFKTESEVFLPTSGL
FAEAILGRSNSAEILDSSRFTDWADNPIPHTAPLIQPVDADQIRHVDQDVSPTLPPATIN
LVNPVSFPDPSLGKALDAIQNGNIFRDMSKSDQLVSVLGDLTQLSGRLGEASSKLTGDAA
TEALKSATQTAALVESLSKALLNSIPQDLKSASAKPPATASEKGAAANFFKDLIKSGNAP
VSERELLESAARALGVPLSGDPLANPVTFAGTSGDFFPPSPGLGGFSPDGFSINDFLAGG
DVREGLIFPDQSNRVDKILLSNFDINQSDLTEDHKMALDLLAKIMDNDLDIRILAFEGRA
SSTGDDENNITLSHNRAKTVKDYLSVKGVSDERLGLVNGYGSALSLSNTPNQENRIDRSV
VISYQWKLAAVSEPQPSVDPSASRFWAISLSFSAGGGFVIGGSVFIGTLRNLTTNKIRAI
YIFVGGLDGALGVPFNATGSADSTGEVSFTTRQPLTFESFDATLVSVFGYQVGIFAGVTQ
TRIRFPMIDSDEPGKTVTVDIPGVGIGQIQSASAIAQLGVLNVQDN
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaaaataatatagtatcggataaacatatcagtattaaagaaataaaatcc
atccgcacccttaaaggtctggatgaaatgcaattaaagagcctggaggccacagggata
cagactgtgctggacttggctacctcagtcatattcaggacagccacgacattattacgg
ttgtctcaaaatcctcaaagtgacgcatcaaatattgcatttctccttgacccaaattat
actaatcggcctttaaatgactgtatgcagtggccggtctcttccatcaaaggcgttggc
aaggttcagcaggaggccatggaaaaagccggtatgctgaccgtggcagatctggcacaa
tttccaggatatcatgaagccacaaaaattctggggtattaccggcgggatgaagatcca
gacacagtcttttttgaaccgccgtctgcaccacagtctctgctgccggacattgtgggt
gccactgattcatctgcccggttttctcattttgtgaccgagcgggacatccgggatgca
ctgattctcgtggataatcagtgcggtcccatatcccctgtcagcagaatttttactgaa
aatcactgcccgctgatttctctgggatacgtgtccatgctccgtcagacctggaccaat
gtcggaaccagtctgggggaagtggttcacagcctggccctggcgccgggagaatcccga
aatattgtcaccattgactggaaacggacccacctgagtgtcagggatgaaaaaaccaaa
gtcacggaacaggtcaacagcgtacaggtccacaagcgggcgctggacgaagttgtccgc
actgtggcggaagaacaccaggccgggtccacccagaccgctgccgccaatgcagcaact
gctggatcatttgtagccgcaggtgctgttgtcggtggtattggcggcggtgtcgccggt
gccgtcaccggattggtggcgggaaatgttgccaatgtggccgggggtacccccactatt
gccggtgccggcgttggggccgctgtgggcgccggtgctggagcgattgccggcagtgtg
attggtaccggcgccgttgccctgggttccatagaatcagattccagtggcaatcgtgaa
attattggaaaaaaccagcagcgaatcacccaggcaacccagcagaaatcatcagccatc
cggtctttatggtccagtatcgtacttgaaaatcaagaagctgagcaaagccatgtggtc
acgacaacggtgaccaactataatcacatgcatgccctcactgttcaatactatgaagta
atgcagcattattgcgtgaccatgtcgttagatgatattgaaccgctgttgtttttaccg
ttcaaacccctgtcttttgggttggaggacatcgaacagttctggcctatcctccgggac
gcggtggaggatgattttttggtgagccgcctggacgaggcctttgggctggacgggttt
attgtaccacccgtcaccccgtttgacccggatgctgccatttcagaccgaatcaccctg
gaaatacaggaccgggactggaatcccagttttcccatggaacccaaaatcatcaaaaaa
aatggaaccagagtcgccttgtccatcatcaacagcagtatccgcaccctgcgtgtgaat
ggtcagaatgtggttcaactcagataccgcacctatgaagacattcaaattgctgatatt
gaaaaagtggttgtcgaaagactggccgcagcagttgacagccggataaccgttcgtatc
cgcacaaaaataaaagaaaccatcaacggggaactgatcacggcagtgaccccctttcaa
tctctgggaacaaaaacaattcccagtttttctcccggcggtaaaccagcggcagaattc
aactggcggattgccgacaacctgaatgatgtgtttgaggattttaaggagatgattcgt
gagcagcagaatgctctgctccagattaccaccattgtacagcgtcagccttatttttat
accaaggtactcctgcaatctttggaggccggtgaactcatcgacgtattaagcagcctg
aaactgaaaattaacgacagtgaaatccatctgaacgacctggttcatgttgtcccggtg
ggaattacagccaacagcatggtgtttaaaatgaagaatgctgcagcattggtgctgcag
ggaaaatctgatccattccgcgatatgaagctctacgccaaggagctggcaacctttttg
gcccgccaggtgaatttgttcaaaaccgagtctgaagttttcctgccgacctctggattg
tttgctgaagccattcttggccggtccaacagtgccgaaatcctggattcttctcgattt
accgactgggctgataatcctattccccacacggcaccattgattcaacctgtggatgcc
gatcagatacggcatgtggatcaggatgtgtctccgacattgccgcccgctaccatcaac
ttggtcaatccggtcagttttccagatccctccctgggtaaagccttggatgcgatccaa
aatggaaatatattccgggatatgtccaaatcagaccaactggtttcggtgcttggagat
ctgacccaattgtccggccgactcggggaggcatcgtccaaattaaccggtgatgccgcc
accgaggccttaaagtctgccactcaaacggctgcgcttgtggaaagcttgagcaaggcc
ctgttaaacagtattccccaggacttgaaaagtgcctcggccaagccgccggccacagca
tcggaaaaaggggccgctgctaattttttcaaagacttgataaaatccggtaatgcaccg
gtaagcgaacgtgaattgctggaatccgctgcccgggcactgggtgtgccattgtctggg
gaccccctggccaatccggtcacctttgccggtaccagtggcgatttttttcccccgtca
cccggcttaggtggattttccccggatggattctccattaatgacttcctggccggtgga
gatgttcgagagggtcttatctttcccgaccagagcaatcgcgtggataaaattctatta
tccaattttgatattaaccaaagtgatctaaccgaagatcacaaaatggctttggatcta
ttggcaaagattatggacaatgatctggatattcgcattcttgcctttgaaggaagggcc
agcagcacaggcgatgatgaaaacaacatcaccttatcccacaaccgagccaaaacagtg
aaagactatttatcggtcaagggggtgagtgatgagcgcctgggcttggtgaacgggtat
ggcagtgcattgtccttgtccaatacccccaaccaggaaaatcgtattgaccgcagtgtt
gtgatttcctaccagtggaagcttgctgctgtttctgaaccacaaccatcggtagatcca
tcggcatcccgcttttgggcgatctccttgagtttctcagccggtggtggatttgttatt
ggcggcagcgttttcatcggcactctgcgaaatctgacaaccaataaaatccgtgccatt
tatatttttgtgggtggattggatggagccctgggagtcccctttaatgcaactggatct
gcggattcaaccggggaagtttcttttaccacccggcagccgctgacattcgagtcattc
gatgccacgctggtctctgtgtttgggtatcaggtcggcatttttgccggtgtcacccag
acccggatccgattccccatgattgacagtgatgaaccaggcaaaaccgtaaccgtggat
atccctggtgtaggtatcggacaaatacagtctgcttctgctattgcacaactaggcgtt
ttaaatgttcaagataattaa
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