Candidatus Desulforudis audaxviator: Daud_0008
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Entry
Daud_0008 CDS
T00655
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dau
Candidatus Desulforudis audaxviator
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dau03032
]
Daud_0008
03400 DNA repair and recombination proteins [BR:
dau03400
]
Daud_0008
Enzymes [BR:
dau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Daud_0008
DNA replication proteins [BR:
dau03032
]
Prokaryotic type
DNA Topoisomerases
Daud_0008
DNA repair and recombination proteins [BR:
dau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Daud_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACA58577
UniProt:
B1I1I1
LinkDB
All DBs
Position
7452..9890
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AA seq
812 aa
AA seq
DB search
MAAGPGKIVPIDINEELKHSYLDYAMSVIVGRALPDVRDGLKPVHRRILYAMHNLGLTAD
KPHRKSAYVVGEVLSKLHPHGDAAVYDALVRLAQDFACRYPLVDGHGNFGSIDGDAAAAM
RYTEVRMARITSQMLADIDKETVDFIPNYDGTGEEPVVLPSRIPNLLVNGSAGIAVGMAT
NIPPHNLKEVIDGLVYLADHPDAELEDLMRFIPGPDFPTGGKIMGRHGIVEAYRTGRGSI
KMRGHAEFERVGSRTRIVITELPYQVNKARLVEKIAALVREKKIEGISDLRDESDRKGMR
VVIELRREVNPEITLNLLYKHTQLQDNFGVILLALVDGQPQVLALKDILSHYLGHQREVI
TRRCRYELSQAQARLHIVEGLRIALAHLDEVIQTIRRSRDVAEARLGLMAGFGLSEKQAQ
AILDMRLQRLTALERDKLENEFNDLVAAIERLEALLADEQKILAVVKEELLAVRDKFADP
RRTELVAEDADFNPEDLIPQEDAVIILTNDGYIKRMPPSVYRSQRRGGRGIAGVETKVQD
FVRHLFVGKTHDYLLFFTERGKVYRVKVYEIPEAGRQARGTAVVNLIPVANGERVTAVIP
VTEYSGDAFLFMVTRKGIVKKTVLQEFDSARRDGLIALTLDEGDELVDVKITDGKSEVLL
GTRNGMVIRFPEGQVRPMGRTAHGVRGISLREGDMVVGMDIVDPDDQLLVVSEKGYGKVT
PVKEFRVQSRGGFGLIAARVSGRNGPLVSLSLVGRGEEILIVSKSGILIRMKIDEIPQFG
RQAQGVRLMRLAPGDAVVAVAWILPEDPPQGE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
ttggctgccggcccgggaaaaattgtgcccattgacatcaatgaagaactgaagcattcc
tacctggactacgccatgagcgtaatcgtggggcgggccctgcccgacgtgcgtgacggc
ttaaaacccgtgcaccggcggattctgtatgcgatgcacaacctggggctgaccgcggac
aagccccatcgcaagtcggcctacgtggtcggcgaggtgctctccaagcttcacccgcac
ggggatgccgccgtgtacgacgctctggtccggttggcgcaggatttcgcctgccggtat
cccctcgttgacggtcacgggaacttcggttccatcgacggggacgcagccgcggccatg
cggtataccgaggtccggatggcccggatcacgtcccagatgctggcggacatcgacaag
gagacggtggatttcattccgaactacgacgggaccggggaggagcccgtggtgctcccg
tcccggattccgaacctcctggtgaacggatcggccgggattgcggtcggcatggccacc
aacatcccgccccacaaccttaaggaagtcatcgacggcctggtgtacctggcggaccac
ccggacgccgaactcgaagacttgatgcggtttatccccgggccggacttcccgaccggg
gggaagatcatgggccgtcacgggatcgtggaagcctaccggaccgggcgcggatccatt
aagatgcgcggtcacgccgagttcgagagagtcggttcccggaccaggatcgtgatcacc
gaactgccctaccaggtgaacaaagcgcgcctggtggaaaagatcgccgcgttggtgcgg
gagaagaagatcgagggtatctccgacctgcgtgacgagtccgaccgcaagggaatgcgg
gtcgtgatcgaactgcggcgggaggtcaatcccgagatcacgttgaatctcctttacaag
cacacccaactccaggacaacttcggggtgattctgctggccctggtggacggtcaaccc
caggtgctggctctcaaagacatactttctcactacctcggacaccagcgggaagtcatc
acccggcggtgccgttacgaactcagccaggcccaggcccgcctgcacatcgtcgagggg
ttgcggatcgccctggcccacctcgacgaagtgatccagaccatccgccgcagccgagac
gtggccgaggcgcgtctgggcctgatggccggcttcggcctgagcgaaaaacaggcgcag
gccattctggatatgcgcctgcagcggctgaccgccctggaacgggataaactggaaaac
gagttcaacgacctggtggccgcgatcgagcgtctcgaggcgctcctggccgacgagcaa
aagatcctcgcggtcgtgaaggaagagttgctggcggtgcgggacaagtttgccgatccc
cgccggaccgagctggtggccgaagacgcggacttcaaccccgaggacctgatcccgcag
gaggacgcggtgatcatcctgaccaacgacgggtacattaagcgcatgccgccctcggtg
taccgcagccagagacggggcggccggggcatcgccggcgtggaaaccaaggtgcaggac
tttgtccgccacctgttcgtcggcaagacgcacgactacctcctgttcttcaccgagcgc
ggcaaggtataccgggtgaaggtgtacgagattcccgaagcgggccgacaggcccggggg
accgccgtggtgaacctgatcccggtcgcgaacggcgagcgggtgaccgcggttatcccg
gtaaccgagtactccggggacgccttcttgtttatggtcacccgaaaggggatcgtgaaa
aagacggtgctgcaggagttcgattcggcgcgccgggacgggctgatcgcgctcaccctg
gacgagggcgacgaactggtcgacgtgaagattaccgacggcaagtccgaggtgcttctg
ggaaccagaaacggcatggtaatccgtttcccggagggccaggtccggccgatgggccga
acggcccacggcgtccgcgggatcagcttgcgggagggcgacatggtggtcgggatggac
atcgtcgacccggacgaccaactcctggtggtgagcgagaaaggctacggcaaggtgacg
ccggtcaaagaattccgggtccagtcgcgtggcggcttcggactgatcgcggcccgggtg
tccgggcgtaacgggccgttggtgtcgttgagcctggtgggccggggtgaagaaattctg
atcgtcagcaagagcgggatcctaatccggatgaaaatcgacgaaataccgcagtttggg
cgccaggcccagggagtgcgcctgatgcgcctcgctccgggcgacgcggtggtggccgta
gcctggattctgccggaggacccgccccagggcgaataa
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