Candidatus Desulforudis audaxviator: Daud_0253
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Entry
Daud_0253 CDS
T00655
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dau
Candidatus Desulforudis audaxviator
Pathway
dau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Daud_0253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dau03021
]
Daud_0253
03400 DNA repair and recombination proteins [BR:
dau03400
]
Daud_0253
Enzymes [BR:
dau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Daud_0253
Transcription machinery [BR:
dau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Daud_0253
DNA repair and recombination proteins [BR:
dau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Daud_0253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACA58814
UniProt:
B1I1B3
LinkDB
All DBs
Position
270880..271827
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVEMDPEGTYGKFVVDPLERGYGITLGNSLRRVLLASLPGAAVTAVKIDG
VLHEFSSIPGVREDVTELILNLKSLRLKLYGEEDRLMRIEAEGEGRITAGDIITSPDVEI
LNPDLHIATLEPDARLYMELTVGRGRGYVPAEKNKRGNHVIGVIPVDSIFTPVTKVNFTV
DKTRVGHDTDFDKLTMEVWTDGSLRPDEALSLAARITTEHLRLFVGLTESVNNVEIMVTK
EEEKKNKLLEMPIEELDLSVRSYNCLKRAGINTVEELIQRNEEEMMKVRNLGKKSLEEVV
RKLGELGLDLRHDEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaaaccgaagatcgagtgcgttgagatggatccggagggcacgtac
gggaagttcgtcgtcgaccctctggaaaggggctacggtattacgctgggtaattcgctc
cggcgcgtgcttttagcctcgctgcccggggcggcggtcaccgccgtcaagatcgacggg
gtgctgcacgagttttcaagtattcccggcgtgcgtgaagacgtcaccgagctgatccta
aacctgaaaagcctgcgtctgaagctctacggcgaagaggatcggttgatgcggatcgag
gcggaaggcgagggccggatcaccgccggcgacatcatcaccagtccggatgtggagatc
ctgaatccggacctgcatatcgccacgctggagcccgacgcacgattgtatatggaattg
acggtgggccggggacggggttacgttccggcggagaaaaacaagcgcggcaaccacgtg
atcggcgtgattcccgtcgactccatctttacgccggtgaccaaggtgaactttacggtg
gacaaaacgcgggtgggccacgacaccgactttgacaaactaactatggaggtctggacc
gacggcagcctgcgcccggacgaggcgttgagcttggccgcgcggatcaccacggaacac
ctgcggctgttcgtgggtctcaccgaatcggtgaacaacgtcgagatcatggtgacgaaa
gaagaagagaaaaagaacaagcttttggaaatgcccatcgaagaactcgatctttccgta
cgttcgtacaactgtctgaaacgggccgggatcaacacggtggaagaactcatccagcgc
aacgaggaagaaatgatgaaggtgcgcaacctgggcaagaagtcgctggaggaagtagtg
cgcaagctgggtgaactcggcctcgacctgcggcatgacgaggaatag
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