Candidatus Desulforudis audaxviator: Daud_0293
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Entry
Daud_0293 CDS
T00655
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dau
Candidatus Desulforudis audaxviator
Pathway
dau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Daud_0293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dau03400
]
Daud_0293
DNA repair and recombination proteins [BR:
dau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Daud_0293
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Daud_0293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
nSTAND_NTPase5
AAA_22
DUF87
Kinesin
AAA_16
Microtub_bd
URO-D
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ACA58854
UniProt:
B1I0V9
LinkDB
All DBs
Position
314562..316586
Genome browser
AA seq
674 aa
AA seq
DB search
MPPFKLVSDYVPRGDQPQAIENLVRGLERGLRHQVLLGVTGSGKTYTMAQVISRVQRPTL
VIAPNKTLAAQLCAEFKEFFPENAVEYFVSYYDYYQPEAYLPSSDMYIEKDASINEEIDK
LRHSATSSLFERRDVIIVASVSCIYGLGDPEEYRNLVVSLRRNGGYDRDAVLRKLVSIQY
ERNDINFGRGRFRVRGDVLEVFPAASGERALRIEFFGDEVERILEFDALTGEVLGERQHV
SILPASHYATSKDRLDRAVTAIETELTERLAELRAANKLLEAQRLEQRTNYDLEMLRELG
YCKGIENYSRHLTGREPGAPPFTLLDYFPDDLLIIVDESHITIPQIGGMYEGDRSRKVAL
VEHGFRLPSAFDNRPLTFSEFMARVRQGVYVSATPGPWELKHSAAVVEQIVRPTGLVDPE
MVVRPTRGQIDDLLGEIRQRVARNERVLVTTLTKRMAEDLCDYFRELGLKVRYLHSEINT
LERMEILRDLRLGTFDVLVGINLLREGLDLPEVSLVAVLDADKEGYLRSERSLIQTAGRA
ARNLNGKVILYADQITGSMRRALDETERRRERQMAFNRAHGITPQTVQKAVRSVIEATRA
AETQAPYYAVSEKRLTRSELKKLIARLEKDMRYAARHLEFERAAQLRDALIELRLQLQPK
GVRSLRPAVGDEPE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgcccccttttaaactcgtatccgactatgtgccccggggcgaccagccccaggcgatc
gaaaacctggtccgcggcctagaaaggggcctgcggcaccaggtgctgctgggggtgacc
ggctccggaaagacctataccatggcccaggtgatcagcagggttcagcggccgacccta
gtgattgcgccgaacaagactttggccgcgcagctttgcgcggagttcaaggagtttttc
cccgagaacgcggtggagtacttcgtgagttactacgactactaccagccggaggcctac
ctcccgtcctcggacatgtatatcgagaaggacgcctcgatcaacgaggagatcgacaag
ctccgccactcggcgacttcgtccctgttcgagcggcgggacgtgatcatcgtggcctcg
gtgtcctgcatctacggcctgggcgacccggaggaataccggaacctggtcgtttccctg
cgccggaacggcggctacgaccgggacgcggtgctccggaagctggtaagcatccagtac
gaacggaacgacatcaatttcgggcgcggccggttccgggtgcgtggcgacgtgctggag
gtctttccggccgcctccggggagcgggcgctccggatcgagttcttcggtgacgaggtg
gagcggatcctggaattcgacgccctgaccggggaagtgctgggggaacggcagcacgtc
tccatcctgccggccagccactacgccacctccaaggaccggctggacagggcggtcacg
gccatcgaaacggaactgaccgagcgcctggccgaactccgggcggcgaacaagcttctg
gaggcccagcgcctggagcagcgcacgaactacgacctggaaatgttgcgggaactgggt
tactgcaagggcatcgagaactactcccgccacctgaccgggcgggaaccgggagcgccg
ccctttaccctgctcgactacttccctgacgacctgctgatcatagtggacgagtcgcac
atcaccatcccccagatcggaggtatgtacgagggcgaccgctcacgcaaggtggccttg
gtggaacacggttttaggctgccgtcggccttcgacaaccggcccctgaccttctcggag
ttcatggcccgggtccggcagggggtgtatgtttcggctactcccggcccatgggaactg
aaacacagcgcggcggtagtggaacagatcgtgcgcccgacggggctggtggacccggag
atggtggtccggcccacccggggccagatcgacgacctcttgggcgagatccggcaacgg
gtggcgagaaacgagcgggtgctggtcaccaccctgaccaaacggatggccgaggaccta
tgcgactacttccgggaactgggcctgaaggtccggtacctgcactcggagatcaacacc
ctggagcggatggagatcctgcgcgacctgcgcctggggacctttgacgtcctggtgggg
atcaacctgctgcgggaggggctggacctgcccgaggtgagcctggtggctgttctggac
gccgacaaggaggggtacctccggtccgagcggtccctgatccagacggcggggcgggcg
gcccggaacctgaacgggaaagtgatcctgtacgccgaccagatcaccggatccatgcgg
cgcgcgctggacgagaccgaacggcgccgtgagcgtcagatggccttcaaccgggcgcac
ggcattaccccgcagaccgtgcagaaggcggtgcggagcgtgatcgaggccacccgggcg
gccgaaacccaagcgccctactacgcggtgagcgagaaacggctgaccagaagcgaactg
aagaaactgatcgccaggctggagaaggacatgcggtacgcggcccggcatctcgagttc
gagcgggcggcccagctgcgcgacgccctgattgaactccggctgcagcttcagcccaaa
ggcgtccgctcgctccgcccggcggtcggcgacgaaccggagtag
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integrated database retrieval system
