Candidatus Desulforudis audaxviator: Daud_1061
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Entry
Daud_1061 CDS
T00655
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dau
Candidatus Desulforudis audaxviator
Pathway
dau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Daud_1061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dau03019
]
Daud_1061
Messenger RNA biogenesis [BR:
dau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Daud_1061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF3149
KH_2
Motif
Other DBs
NCBI-ProteinID:
ACA59573
UniProt:
B1I3H5
LinkDB
All DBs
Position
1117322..1118863
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AA seq
513 aa
AA seq
DB search
MLENTAIIIAITTGFVAFIGGYFLRKLLGEMKITSAEERARLVLEEAAKEAESKKREAVV
EAKEEILKLRNEVERESRERRSELQRQERRLVQKEESLDRKLEALEKKEENLAKRETELA
KMHEELKALHQKELQELERISGLSTEEARQILLQDVEKEIQQEAALLVKEIEGRAKEEAD
RRARNIISLAIQRCAADHVAESTVAVIPLPNEEMKGRIIGREGRNIRAFETLTGVDLIID
DTPEAVIVSGFDPIRRETARMALEKLISDGRIHPARIEEMVEKARKDMEVQIRDTGEQAA
FDANVHGLHPDLIKLLGRLKYRTSYGQNVLKHSVEVAYLAGLMAAELRADEKLARRAGLL
HDVGKAVDHEVEGPHVTIGVDLAKKYGESPEVLHAIAAHHGDEEPETVEAVLIQAADAIS
AARPGARRETLEAYVKRLTKLEDIANSFPGVEKAFAIQAGREIRIMVKPDKVDDLGAVRL
VRDIARKIENELEYPGQIKVVIIRETRVVEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgaaaacacagcaataataatcgccatcactaccggattcgtagcatttatcggt
gggtatttcctgcgcaagctgctgggtgagatgaaaatcacgtccgcggaggagcgggcc
aggttggtacttgaggaggcggccaaagaggctgaatccaagaagagagaggcagtggtt
gaggccaaggaagagatcctgaaacttcggaacgaggtagagcgggaaagccgggaacgg
cgcagtgagctgcagcgccaggaacggcgtctggtgcagaaggaagagagtctggaccgc
aaactagaagccctggagaaaaaggaggaaaacctggccaaaagagagactgaactggct
aaaatgcacgaggaactgaaggcgctgcaccagaaagagctgcaggaactggaacggatt
tccggcctttccaccgaggaggccaggcagattctgctgcaggacgtggagaaagaaatc
cagcaggaagcagcattgctggtcaaggagatcgaggggcgggccaaggaggaggccgac
cggcgggcccggaatattatttctctagccattcaacgctgtgcggctgaccatgtggcc
gaatcgacagtggcggtgatcccgctgcccaacgaggaaatgaagggacggatcatcggg
cgtgagggacgcaacatccgtgcctttgagaccctgaccggggtggacctgattattgac
gacacaccggaggccgtgatcgtgtcaggatttgacccgatccgccgggaaaccgcgcgt
atggccctggagaagttgatctcggacggccggatccatccggccagaatcgaagagatg
gtggaaaaggcccgcaaggacatggaggtccagatccgcgataccggcgagcaggcggct
ttcgatgcgaacgtgcacgggttgcacccggatctgatcaagctgctggggcggttaaag
taccggacgagctacggccagaatgtgctgaagcattcggtcgaggtcgcctatctggcc
ggcttgatggctgccgaactgagggcggacgaaaagctggcccggcgggccggacttctg
cacgacgtcggcaaggccgtggaccacgaggtggagggtccccacgtgaccatcggcgtc
gacttggccaagaagtacggtgaaagccccgaagtcctgcacgccatcgctgcccaccac
ggcgatgaagagccggagaccgtggaagcggtgctgattcaggccgccgatgccatatcg
gccgcccgtccgggagcccggcgcgaaacattggaggcctacgtcaagcggttgaccaaa
ttggaagatatagccaactccttccccggagttgaaaaggcctttgcaatccaggctggt
cgtgagatccggattatggtcaagccggacaaagtggacgacttgggtgcggtacgcctt
gtccgtgatatcgcgcgtaagatcgaaaacgaacttgaatatccgggtcagatcaaggtt
gtcattatccgtgagacccgggtggtcgagtatgccaaatag
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