Candidatus Desulforudis audaxviator: Daud_1276
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Entry
Daud_1276 CDS
T00655
Name
(GenBank) UvrD-like DNA helicase, C terminal
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dau
Candidatus Desulforudis audaxviator
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dau03400
]
Daud_1276
Enzymes [BR:
dau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Daud_1276
DNA repair and recombination proteins [BR:
dau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Daud_1276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_lid_12
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACA59787
UniProt:
B1I493
LinkDB
All DBs
Position
complement(1339323..1343015)
Genome browser
AA seq
1230 aa
AA seq
DB search
MSSRNWTGPQEAAIGCREKNLLVAAGAGSGKTAVLVERVIRRISDPAAPVDVDRLLVVTF
TNAAAAEMRKRVAEALERELEKHPGMPLLEHQLRLLPQADITTIHSFCAELLRRYHYLID
LDPEFRVADETEAAILRQETLEEFFEEQYRVITGDPDLEFLVEAYGGERDDLKLQNLVSG
LHRFARSNPWPEAWLARAAAFGADPQGLDGDGPLAWGLRDLVGTGLEAAVFELRAALEAA
KAPGGPAVYADALAAEVEGTARLAGLVAGDWEPLRAAFLAFGFTPRLPAARAGVDQELKD
LCSRCRKKAKERIQNLKETFFARRPEELLSEMAALGPAMRRLAALAADFGEAYRTAKLAR
NLVDFADLEHYCLQILLAPGSTPEAPVPSPVAAGLREYYVEVLVDEYQDINAVQETILRL
VSRQDAAAPNLFMVGDVKQSIYRFRLAEPALFLEKYRAFDTGEDAGGARRIDLSHNFRSR
ESIIHAVNAVFRRIMTPAVGELAYDTAAELVCGGTPAQLEGSGPPVEVHLLGAPTSVGRD
TAGTADDEPDRSDEADLTAVQREARLVAGIIRRLAGLGGECTVPYRDIVVLMRATTGKAG
TYLEEFRRQNIPAYAKVGTGYFEAVEVETVLSLLKVIDNPHQDIPLAGVLRSPLVGLGAA
ELAAVRLADKEGDFFRAVVAAAGQGGRLGAVLAGFLERLEKWRSQARCGSLADLIWDVYR
TTGYYDYVGGLPGGAGRQANLRALYDRARQYEATAFRGLFRFLRFIELLQEGGQDLGPAP
ALAESENVVRIMSIHQAKGLEFPVVILADMGRRFYMPDLNGEVLLHKDLGLGPYFVDPGA
RVSHPTAAWHVVRERLRREQLAEEMRILYVAMTRARERLILTGSAGRLEQAVLRWSHAAA
GDGETLPVPVLAEAESFLDWVMPVLMAHPDGEPLRRLAVRSRPAAGTPKDRSRWEVHLHR
PEDLEEAAGADPDTAAVLESLRRLAPIPADGGLDEAVHRALSWHYPWSALASCGAKISAT
EVKRRFAAAAAGEEEVPAVFPYRAPPARPAFLETARGLSPQAFGRAMHVVLQHLDLAGDL
SVDGIRAQVAGLEEREFLTATEARAIDAEKLAGLFAGGLGRRLAGALWVRREWPFCLVVP
AHEIYPGLEGHPEERVMVQGIIDCLFAEPDGLVLVDYKTDRVGPGGEAALADRYRGQLDL
YARAVEAVLRRRVKERYLFLVMTGSAQIIQ
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagaaactggaccgggccccaagaagcggccatcggctgccgggagaagaac
ctcctggtcgcggccggtgccggctcggggaagacggcggtgctcgtggaaagggtgatc
cgccgcatttccgacccggccgcgccggtggacgtcgaccggctcctggtggtcaccttc
acgaacgccgccgcggcggagatgcgcaagcgggtggccgaggcgctggagcgcgagctg
gagaaacaccccggcatgccgttgctggagcaccagctgcggcttctgccccaggcggac
atcactacgattcactccttctgcgcggaactactccgccggtaccactacctcatcgac
ctggacccggagttccgggtggccgacgagaccgaagccgcgatcttgcgccaggaaacc
ctggaggagttctttgaagagcagtaccgggtgatcaccggcgaccccgacctggagttc
ctggtcgaggcgtacgggggtgaacgggacgacctgaaactacagaacctggtgtcgggt
ctgcaccggtttgcccggagcaatccctggcccgaggcttggctcgcgcgggccgccgcc
tttggcgcggacccgcagggtctggacggggacggtccgctggcgtggggcttgagggac
ctggtggggacggggctcgaggccgccgtgtttgaactgcgggccgccctggaagcggca
aaagcgccgggcgggccagcggtctacgcagacgcgctcgccgcggaggttgaagggacg
gcgcggctcgcgggcctggtggccggtgattgggagccattgcgggccgccttcctggcc
tttgggttcacgccccggctgccggcggcccgcgccggcgtggatcaggaactaaaggat
ctgtgttcccgctgccggaagaaagccaaggagcgtatccagaacctgaaggagaccttt
ttcgcccgccgccccgaggaactcttaagcgagatggcggccctcggcccggcgatgcgc
cggctcgcagcgctggcggccgatttcggggaggcctaccggacggccaagctagcgcgc
aacctggtggacttcgccgaccttgaacactactgcctgcagatcctgctggccccgggc
tccaccccggaggcgcccgtgccctcgccggtggcggccggactccgggaatactacgtc
gaggtgctggtcgacgagtaccaggacatcaacgccgttcaggagaccatcctgcgcctg
gtgtccaggcaggatgccgccgcgcccaacctgttcatggtgggggacgtgaaacagagc
atttaccggttccggctggccgaaccggcactctttttggaaaagtaccgcgcgtttgac
acgggggaggacgccggcggagcccggcgcatcgacctgagtcacaactttcggagccgg
gaatcgatcatccacgcggtgaacgcggttttccggcggatcatgactccggcggtcgga
gaactggcctatgacacggctgcggaactggtatgcggcggcacgccggcccagctcgag
gggagcggcccgcccgtggaggtgcacctgctcggggcacccacgtcagtgggtcgggat
accgccggaacggcggatgacgagccggaccggtcggacgaggccgacctgaccgccgtc
cagcgcgaggcgcggctggtcgcggggatcatccggcgcctggcgggcctcggcggggag
tgcacggtgccctaccgggatatcgtggtgctgatgcgcgccaccactgggaaggcgggc
acctacctggaggaattccgtcggcagaacatcccggcgtacgcaaaggtcggcacgggc
tacttcgaggccgtggaagtggagactgtgctgtccttgctgaaggtgatcgacaacccg
caccaggacatcccgctggccggtgtgctccgctcgcccctggtgggactcggcgcggcg
gaactggccgccgtccgcctcgcggacaaagagggcgacttcttccgggcggtggtggcg
gcggcggggcagggcggccgcctgggcgcggtcctggcgggcttcctggagcggctggaa
aagtggcgctcgcaggcgcggtgcgggtctttggcggacctgatctgggacgtgtaccgg
accacgggttactacgactatgtcggcgggctgcccggaggtgccgggcggcaggccaac
ctgcgggccctatacgaccgggcgcgccagtacgaagcgaccgccttccgggggctgttc
cggttcctgcgcttcattgagctgctccaggaagggggtcaggacctcgggccggccccg
gccctggccgagagcgagaacgtggtccggatcatgagcattcaccaggccaaggggctg
gagtttccggtggtgatcctggccgacatgggccggcggttctacatgccggacctgaac
ggggaggtgctgctgcacaaggacctcgggctcgggccatacttcgtggacccgggggcc
cgggtcagccaccccaccgcggcgtggcacgtcgtccgggagaggctgcgccgggagcaa
ctggcggaggaaatgcgcatcctgtacgtggcgatgaccagggcccgcgagcggctgatc
ctgaccggctcggcgggccggctggagcaggccgtgctccgttggagccacgcggccgcc
ggtgacggggagaccctgcccgtgcccgtgctcgcggaggccgagagtttcctggactgg
gtgatgccggttctgatggcgcacccggacggcgaaccgctgcgccgccttgccgttcgc
tcccgcccggcggccggaacgcctaaagaccggtcccggtgggaggtgcacctgcaccgg
ccggaggacctggaagaggcggcgggggcggacccggacacggcggccgtgctcgagagc
ctgcgccggctggcgccgatacccgcggacggcggcctggacgaggcggttcaccgggcg
ctgtcctggcactatccctggtccgcccttgcctcttgcggcgcaaagatctcggccacc
gaggtcaagcgccgttttgcggcggccgccgccggagaggaggaagtgcctgccgttttc
ccgtaccgtgcgccgcccgcccgcccggcattcctggaaaccgcccggggactctcgccg
caggcgttcggccgggccatgcacgtggtgctccagcacctggacctcgccggggacttg
agcgtggacggcatccgcgcgcaggtggccgggctggaggaaagggagttcttgacggcg
acggaggcccgggcgattgacgctgaaaagctggccgggctgttcgcgggcggcctgggg
cggcgcctcgccggggcgttgtgggtgcgccgggagtggccgttttgcctggtcgtcccg
gcccacgagatttaccccgggctggagggccatccggaggagcgggtgatggtccaggga
atcatcgactgccttttcgccgaaccggacggcctggttctggtggactacaagaccgac
cgagtggggccgggcggcgaggccgcgctggcggaccggtaccgcgggcagttggatctt
tatgcccgggccgtggaggcggtcctgagacggcgggttaaggagcgttaccttttcctg
gtaatgacgggttcggcccagattatccagtaa
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