Candidatus Desulforudis audaxviator: Daud_1277
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Entry
Daud_1277 CDS
T00655
Name
(GenBank) UvrD-like DNA helicase, C terminal
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dau
Candidatus Desulforudis audaxviator
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dau03400
]
Daud_1277
Enzymes [BR:
dau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Daud_1277
DNA repair and recombination proteins [BR:
dau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Daud_1277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ACA59788
UniProt:
B1I494
LinkDB
All DBs
Position
complement(1343008..1346505)
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AA seq
1165 aa
AA seq
DB search
MALRFILGRAGTGKTRLCLEEIRKELRQAPDGPPLVFLVPEQATFQTEYALALTPGLSGM
FRAQVLSFRRLAWRVFSEVGGAARPHVGDVGKRMMLARILARRRNELRLFGRAAGQYGFS
GTLAGVLSELKTYLVTPEALEQAVRMLPGTAETDSLQAKLEDLRLLYTDFERELAGKYID
PDDYLTLLAARLGESPTLRAAEVWVDGFAGFTPQEYAVLEALLKAAARVNVALCLDPRSG
RREDLELFQVTRDTRARLAELARKNGVELERPVELAGPPARFRANPALAHLEREFFRRPT
KKFAGPPENLRLVAAASRRAEVEGAAREILRLSRERGWRWRDVSLVVRNLADYHELVATV
FADYGIPCFIDRKRPVRHHPLVELIRSALETVTENWTYDPVFRYLKTDLVPVSRGDVDLL
ENYVLAHGIKGAKWADPEDWHYRRSDALNRPVPNGTGAPAPSDRDRYLREKVNRIRRRAA
RHLLDFQRRVQAAGTVRELTAALYDLLSDLDVPGRIEEWSREAETEGRLEAAREHRQLWD
GVVELLDQVVETLGDEALTPEEYGRILDSGMDGLQLALIPPALDQVLVGSLERSRNPDIR
AAFVLGVSEGVLPGRHGGTGLFTDREREVLLAAGLEVAPDTRRKVYEEQYLVYIALTRAG
HYLWVSYPLADEEGGALAPSSVIPRLRELFPGLREETLALEPEGTAPGADLPYVTAPGRT
LGFLVTRLRDWKSGVTVDPVWWSVFNWFAAHAGWRERCAPVLAGLFYENREPRLDPELTP
ELYGSRLVVSVSRLEEFRGCPFAHFARYALRLKERDVCRLAAPDIGLFFHAALKTFEDRL
REAGMEWDALESADCTRLASAVVEELAPQLQSEVLLSSPRLRFLTGKLERVVERTAGVMA
AHARHSRFQPVAVEVAFGPGRDVPGPAYPLPGGGSVELAGRIDRVDVAHTDNAAYLRVID
YKAGPRSLALDDVYYGLNLQLLVYLEAGLREAAALAGRECRPAGAFYFRVQNPLLKGGTP
VPPAEVAPRLLKAFRLQGLVLDDPALLRLMDDAIGSESAIVPAGLKQDGTVKKKPGVVSA
AQLERLQEHVRRVVAETAAEIQAGVVAIAPYRKGQANACRYCAFKPVCAFDPLLESNRYR
QLRALTAGELWRLLGLPEEDEPGDE
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttggctttgcggtttatcctggggcgggccggtaccggcaagacccggctctgcctggaa
gagatccggaaagaactgcggcaggcgcccgacgggccgccgcttgtttttctcgtgcct
gagcaggccacctttcagaccgagtacgcgctcgcgctcaccccgggcctgtccgggatg
ttccgggcccaggtgctgagttttcgccgcctggcctggcgggtgttctcggaggtgggc
ggggcggcccgcccgcatgtcggcgacgtgggcaagcggatgatgctcgcccggattctg
gcgcgtcggcggaacgaactgcgcctcttcgggcgggccgccggacagtacggcttttcc
ggtaccctggcgggcgtgctctccgaactgaagacctacctggtcacccccgaggccctg
gaacaggccgtccgcatgctgcccggcaccgccgagacggactccctgcaggccaagctg
gaggacctgcgcttgctctacaccgacttcgaacgtgaactcgccgggaaatacatcgac
ccggacgactacctgaccctgctggccgcccggcttggggaaagccccacgctgcgggcg
gccgaggtgtgggtggacgggttcgccggcttcacgccgcaggagtacgcggtgctggag
gcgctcttgaaggcggccgcccgggtgaacgtggcgctctgtctggacccgcgttcgggg
cggcgcgaagatttggagcttttccaggtgacccgggacacccgggcgcggctggccgag
ttggcgcgcaaaaacggggtggaactggagcggccggtggagctggccgggccgccggcg
cggtttcgggcgaaccccgcgctggcccacctggagcgggagttcttccgccgccctacc
aaaaagtttgccggcccgccggagaacttgcgcctggttgcggccgcaagccgccgggcg
gaggtggaaggggcagcccgggaaatcctgcgcttgagccgggagcggggctggcgctgg
cgggacgtgtccctggtcgtccggaacctggcggactaccatgaactcgtggccacggtg
ttcgccgactacggcatcccgtgcttcatcgaccgcaagcgcccggtccggcaccacccg
ctggtcgagctgatccgctcggccctggagacggtgaccgagaattggacctacgatccg
gtgttccggtacctgaagaccgacttggtgccggtatcccgtggggacgtggacctattg
gagaactacgtgctggcccacggcatcaagggggcgaagtgggcggacccggaagactgg
cactaccggcgctcggacgcgctgaaccgacccgtgcctaacggcacgggtgccccggcg
ccatccgaccgcgatcggtacttgcgggaaaaggtgaaccgcatccggcggcgtgcggcg
cggcacctgctggacttccagcgccgcgttcaggcggccgggacggtgcgagagctgacc
gcggccctgtacgaccttttgagcgacctggacgtgcccggacggatcgaggagtggagc
cgggaggccgagaccgaggggcggctggaggccgcccgcgaacatcggcaactctgggac
ggcgtggttgaacttcttgaccaggtggtggaaaccctgggggacgaggccctgaccccg
gaggagtacgggcggatcctcgactccgggatggacgggctccagctcgccctgattccg
ccggcgctcgaccaagtgctggtcggttccctggaacggtcccggaacccggacatccgg
gcggccttcgtgctcggggtgtccgagggtgtcctaccaggccgccacggcggcaccggg
cttttcaccgaccgggagcgggaggtgctgctcgccgccggcctggaggtggcgcccgac
acccgccggaaggtctacgaggagcagtacctggtgtacatcgccctgacccgcgccggc
cactacctgtgggtgagctacccgttggccgacgaggaggggggcgccctggccccgtcc
agtgtcattccccggctccgggagcttttccccgggctccgggaagagacgctggccctg
gaacccgaggggaccgcgcccggcgcggaccttccttacgtcacggcgcccggccgcacc
ctgggctttctggtcaccaggctccgggactggaaatcaggcgtgacggtggacccggtg
tggtggtcggtattcaactggttcgctgctcacgccggctggcgggagcggtgcgctccc
gtgctggccggccttttttacgaaaaccgggaaccgcgcttggacccggaactgaccccg
gaactgtatgggagccggctggtggtcagcgtgtcccggctggaggaattccggggctgc
ccgttcgcccacttcgcccgctacgccctgcggcttaaggagcgggacgtgtgtcggctg
gccgcgccggacatcgggctttttttccacgccgcgctcaagaccttcgaggaccggctg
cgggaggccggcatggagtgggacgcgctggagagtgcggactgtacccggctggcgtcc
gcagtggtggaggaactggcgccccaactgcagagcgaggttctcttaagttcgccgcgc
ctccggttcctgaccggcaagctggagcgcgtggtggagcggaccgccggggtgatggcc
gcccacgcccggcatagccgcttccagccggtggcggtggaagtcgcgttcgggccgggg
cgggacgtgccggggccggcgtacccgctccccggcggcggctcggtggagctggccgga
cggatcgaccgggtggacgtggcccacaccgataacgccgcgtacctgcgggtgatcgac
tataaggcgggaccccggagcctggcgctggacgacgtctactacggcttgaacctgcag
cttttggtgtacctggaggctggcctcagagaggcggcggcgctggcgggccgggagtgc
cggccggcaggcgccttctacttccgggtacagaacccgctcctcaagggcgggacgccg
gtgccgccggcggaggtggcgccgcgcctcttgaaggctttccgcctgcagggtctggtg
ctggacgatccagcgctcctgcgcctgatggacgacgccatcgggagcgagtcggcgatc
gtgcccgccgggttgaagcaggacgggacggtgaaaaagaagccgggcgtcgtgagcgcg
gcgcagctcgaacggctgcaggagcacgtgcgccgggtggttgcggaaacggcggcggaa
atccaggccggcgtggtggccatcgccccgtaccgcaagggtcaggccaacgcctgccgg
tactgcgctttcaagccggtgtgcgccttcgaccccctgctggaatcgaaccgctaccgg
cagctccgcgccctgaccgccggggagctgtggcgcctgttggggctgccggaggaggat
gaaccgggcgatgagtag
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