Candidatus Desulforudis audaxviator: Daud_1393
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Entry
Daud_1393 CDS
T00655
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dau
Candidatus Desulforudis audaxviator
Pathway
dau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Daud_1393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dau03400
]
Daud_1393
Enzymes [BR:
dau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Daud_1393
DNA repair and recombination proteins [BR:
dau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Daud_1393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
HHH_5
Viral_helicase1
PIF1
Helicase_RecD
UvrD-helicase
nSTAND3
SLFN-g3_helicase
AAA_28
AAA_22
NPHP3_N
AAA_29
DEAD
T2SSE
NTPase_1
MeaB
PhoH
AAA
TrwB_AAD_bind
HHH_2
AAA_23
ABC_tran
AAA_16
HerA_C
Mg_chelatase
ATPase_2
TsaE
MobB
ABC_ATPase
CbiA
ATP_bind_1
cobW
Motif
Other DBs
NCBI-ProteinID:
ACA59902
UniProt:
B1I4I2
LinkDB
All DBs
Position
complement(1475632..1477791)
Genome browser
AA seq
719 aa
AA seq
DB search
MEVIHGYLERITYYNEENHFTVARLQETGKRELTTIVGNLAGITPGESLKLTGKWVQDPR
FGPQFRVERFETVVPATVNGIRKYLGSGLIRGIGPVMAKRIVKVFGLQTLDVIDRSPGRL
TEVDGIGPKRVELITRAWADQKEIRGIMIFLQDHGISAAYAAKIYRQYGNASVEIVRTNP
YRLAADVHGIGFVTADRIARQVGIDPNSVTRAEEGTLYVLNESTSEGHVYLPYETLVSRA
AEMLEVSRDLVVEAVERLAADRRVVREDEAVYLTPFYVAETKLAERLNALRDAGAAVRRV
DTAQVIPWVEKRLGLRLAEKQAEAVSLAVSNKILVITGGPGTGKTTIIRAIISIFQALGA
RVLLAAPTGRAAKRMQEASGHEARTIHRLLEFSPGKGGFQRNQDFPLDADAVIVDEASMI
DTLLMNSLVRAVPLSAALILVGDTNQLPPVGPGNVLRDIIDSGRFGVVTLTEIFRQSRES
RIVVNAHRINRGEFPDLSPLGSGRPSDFYFIQEEDPETAVQTILKLCKVRIPRRFGYHPI
RDIQVLTPMYRGLVGAANLNAELQNLLNPGKDGVVRGHRMFRTGDKVMQVVNNYQKEVFN
GDIGRITAVHLEQQQLKVDFDGRAVSYEFSELDELVLAYAVSVHKAQGSEYPVVIMPVMT
QHYVLLQRNLVYTGVTRGRNLVVLVGTKKALAIAIRNDEPRRRYTRLRERLAYYDLGNG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggaagtaatccacggttatctggaacgaattacttattacaacgaagaaaaccacttc
acggtcgcccggctccaggaaaccgggaaaagggaactgaccacgatcgtgggtaacctg
gccgggatcacccccggggagtctctgaaactgaccgggaagtgggtgcaagaccccagg
ttcggaccacagttccgggtcgagagattcgagacggtggttccggccacagtcaacggc
attcggaagtacctgggttccggactgatcaggggcatcggtccggtgatggccaaacga
atcgtcaaggttttcgggttgcagacactggacgtaatcgaccgctctcccggccggctt
accgaggtggacggcatcggcccgaagcgagtggaactcatcaccagggcctgggcggac
cagaaggaaatccggggaatcatgattttcctccaggaccacgggatcagtgccgcctac
gccgccaaaatatacaggcagtacgggaacgcgtcggtcgagattgtcagaacaaatccc
taccgccttgccgccgacgtgcacgggatcggctttgtcaccgccgaccggatcgcgagg
caggtgggtatcgacccgaattccgtcacgcgggccgaggagggaaccctttacgttctg
aacgagagcacttccgaaggtcacgtctacctcccctacgaaacgctcgtgagccgggcg
gcggaaatgctcgaggtcagccgggatctcgtggtcgaggccgtggagcggctggctgcg
gaccggcgcgtagtgcgggaagacgaggcggtgtatcttactcccttttacgtcgccgaa
accaaactcgccgagcgccttaacgccctccgggacgccggagccgccgtgcggcgggtg
gatactgcccaggtgataccctgggtggaaaagagactcgggctccggctggccgaaaag
caagccgaggcggtgtccctggcggtttcgaacaagatcctggtgatcaccggcgggccg
ggtaccggcaaaaccaccatcatcagggcgatcatcagtatttttcaggccctgggggcg
cgggtccttctggctgcccctaccgggcgggcggcgaaacgcatgcaggaggcctcaggg
cacgaggcccggaccatccaccgcctgctggagttcagccccgggaaaggcggttttcag
cgcaatcaggacttccccctggacgccgacgccgtcattgtggacgaggcctccatgatt
gatactctcctgatgaacagcttggtcagggccgtcccgctgtccgccgcccttatcctg
gtcggggacaccaaccaactgcccccggtcggtccgggaaacgtcttgcgggacatcatc
gactcgggccggttcggcgtggtgacactgaccgagatcttccggcagtcccgggaaagc
cggatcgtggtgaacgcccaccgcataaaccggggcgagttccccgatttgagcccgctg
ggctccggccggccgtctgacttctatttcatccaagaggaggatccggaaacggcggtc
cagaccatcctcaagctgtgcaaggtacgcattcccagacgtttcggataccacccgatc
cgggacatccaggtactgacgcccatgtacaggggcctggtcggcgccgcgaacctgaac
gccgagctgcaaaacctgctgaacccgggaaaagacggggtggtccggggccaccggatg
tttcggaccggggacaaggtgatgcaggtggtgaacaactaccagaaggaagtgttcaac
ggggacatcggccggatcacggccgtgcacttggagcaacaacaactgaaggtggacttc
gacggccgcgccgtcagctacgagttttcggagctggacgaactggtcctggcctatgcg
gtgtccgtgcacaaggcccaggggagtgaatacccggtggtgatcatgccggtgatgact
cagcactacgttctcctgcagcggaacctggtttacaccggggtgacccgcggccggaac
ctggtggtgctggtcggcaccaaaaaggcattggccatcgccatccgcaacgacgagccg
cgccggcgctacaccaggttgcgggagaggcttgcatattatgacctgggtaacgggtaa
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integrated database retrieval system
