Candidatus Desulforudis audaxviator: Daud_1492
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Entry
Daud_1492 CDS
T00655
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dau
Candidatus Desulforudis audaxviator
Pathway
dau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Daud_1492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dau03019
]
Daud_1492
03009 Ribosome biogenesis [BR:
dau03009
]
Daud_1492
04131 Membrane trafficking [BR:
dau04131
]
Daud_1492
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dau04147
]
Daud_1492
Messenger RNA biogenesis [BR:
dau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Daud_1492
Ribosome biogenesis [BR:
dau03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Daud_1492
Membrane trafficking [BR:
dau04131
]
SNARE
SNARE associated proteins
Others
Daud_1492
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Daud_1492
Exosome [BR:
dau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Daud_1492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
TIP49
AAA_22
AAA_5
AAA_14
AAA_33
Sigma54_activat
Zeta_toxin
nSTAND3
NPHP3_N
AAA_28
AAA_18
AAA_7
AAA_3
IstB_IS21
Mg_chelatase
SLFN-g3_helicase
TsaE
RNA_helicase
NB-ARC
DUF815
AAA_19
AAA_lid_PRS2_C
Parvo_NS1
AAA_30
bpMoxR
ResIII
Viral_helicase1
AAA_11
Cytidylate_kin2
Motif
Other DBs
NCBI-ProteinID:
ACA59998
UniProt:
B1I4U3
LinkDB
All DBs
Position
complement(1575230..1577491)
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AA seq
753 aa
AA seq
DB search
MAEKVGWGKLFKEESIRMDTGSTGLFLRVLEALTKDVGRGIARLDPRDMERINVSVGDVI
EIKGNKRTVAKVMPAYMEQRGKNVIQIDGIIRENARAGLGDKVQIQKIPFDNASTIILAP
INAYRAVPKDKDGRYIGKLMEGFPLLKGDKVRINLFGSRTQEFTVVETIPKDVVLVHTDT
IVKVKSQEVTGKKQSLITYEDIGGLQKGIQRIREMIELPLKYPEIFARLGIEAPKGVLLH
GPPGTGKTLIARAVANETDAHFFHVNGPEIIHKFYGESEANLRGIFEEAGKNAPSIIFLD
EIDAIAPKRESVVGEVEKRVVAQLLGLMDGLESRGQVIVIGATNIPNSLDPALRRPGRFD
REITVNIPDKKSRLEILQIHTRGMPLSKDVHLEKIAEITHGYVGADLAALCKEAAMACLR
KVFPQIDLRSNYLSYEVLMELEVTMADFSEAFKDVEPSAIREVFVEVPDVRWSDIGGLDK
VKQELKEAVEWPIKHPGLFTYVKTNPPKGILLHGSPGTGKTLIAKAVANESGVNFISVKG
PALLSKWVGESEKGVREVFKKAKQAAPCIVFFDEIDALVPVRGTGGGDAHVAERVLSQLL
TEMDGVEELKGVVVLAATNRLELIDPALLRPGRFDLLLELPVPGEDERLAILQIHTNGKP
LAEDVDLVNLAIITDGSTGADIQAICNRASLLAIREFLDSSQNDKDPDYSRLQIAAKHFD
AALEEVRRPEPAQIEDQKPRVLTMKKDPEECSS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
ttggcggaaaaggtggggtggggaaaactgtttaaggaagagtcgataagaatggatact
ggatctaccggtttgtttttgcgggtattagaagctttaacaaaagatgtgggtagggga
attgccaggcttgacccccgtgacatggaaaggatcaatgtttctgtcggcgatgtaatt
gaaatcaaaggtaataaaagaactgtggccaaagtaatgcccgcttacatggaacagcgg
ggtaaaaatgttatccaaatcgatggtattatccgggaaaatgcacgggccgggttaggt
gacaaggtacaaattcaaaaaataccgtttgataacgcttcgaccataatcctagctcct
attaatgcttaccgtgctgtacccaaagataaggacggcagatacatcggtaagttaatg
gaaggttttcccctcctgaaaggtgataaagtcagaataaatctttttggctcccgcacc
caagaatttactgttgtagagaccattccgaaagatgtggtgctggttcataccgatact
atcgttaaggtgaagtcgcaggaggtaaccggtaaaaaacaatctctaataacatatgag
gatatcgggggattacaaaagggaattcaaagaatacgggaaatgattgaactaccgctg
aagtaccccgaaatttttgccagactggggattgaggcgccaaagggggtattgctccac
ggtcccccgggtacaggcaaaacattaattgccagagcggtagccaatgaaaccgatgcc
cattttttccatgttaacggcccggaaattattcacaagttttacggggaaagtgaggca
aatctccgggggatttttgaagaggctggtaaaaatgcgcccagtattattttcctggat
gaaatagatgccatcgctcccaagcgggaatcggtcgttggcgaagtggaaaaacgggtt
gtggcgcaactgctggggttgatggacggtctggaatcgaggggccaggtgattgtcatc
ggggccaccaatattcccaattccctggaccccgcgctcaggcggccgggccgttttgac
cgggagattaccgttaacattcccgataaaaagagcaggttggaaatcttgcaaattcat
acccgcggtatgcccctgtcaaaagatgtgcatctggaaaaaattgcagaaattacccat
ggttacgtgggagcagacctggcggctttgtgtaaagaggcggccatggcctgtttaaga
aaagtgtttcctcaaatagacctccggagtaattatctttcatatgaagtccttatggag
ttggaggtaaccatggcggatttttctgaggcttttaaagatgtggaaccttccgccatc
cgggaggttttcgtggaggtaccggatgtccggtggagtgatattggcggcctagacaaa
gttaaacaggaactaaaggaagcggtggaatggcctataaaacatcccgggttatttact
tatgtaaaaaccaaccctcccaaaggtattcttttacacggtagccccggtacgggaaaa
accttaattgccaaagcggtggccaatgaaagtggagtaaatttcatttcagtaaaaggg
cccgccctgctctctaaatgggtcggagagtcagaaaaaggtgtacgggaagtattcaag
aaagcaaaacaagcggcaccgtgtattgttttctttgatgaaatagatgctttagtccct
gtcaggggaaccgggggtggagatgctcatgttgcggagcgggtgctcagccagctcctg
accgaaatggatggggttgaagaattgaagggagtggtagtgttggccgccactaaccga
ctggaactaattgacccggcgctgctaagacccggaagatttgacctcctgctcgagttg
cctgttcccggcgaagacgagcgtctggcgatattacagatccataccaacggcaagccg
ctggccgaagacgtggacctggttaatttggccatcataaccgatggttccaccggcgcc
gatatccaggctatctgcaacagggcttctttgctggcgattagagaatttttggacagt
agtcaaaatgataaagatcccgattactcccggcttcagattgcggcgaagcattttgat
gcggccctggaagaagtaagaagaccggaaccggcccaaatagaagatcaaaaaccccgg
gttctgaccatgaaaaaagatcccgaagaatgctcctcgtaa
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