Dactylosporangium aurantiacum: Daura_06605
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Entry
Daura_06605 CDS
T08497
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
daur
Dactylosporangium aurantiacum
Pathway
daur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Daura_06605 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daur03021
]
Daura_06605 (rho)
03019 Messenger RNA biogenesis [BR:
daur03019
]
Daura_06605 (rho)
Transcription machinery [BR:
daur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Daura_06605 (rho)
Messenger RNA biogenesis [BR:
daur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Daura_06605 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
UWZ55861
UniProt:
A0A9Q9IHP5
LinkDB
All DBs
Position
1488174..1490306
Genome browser
AA seq
710 aa
AA seq
DB search
MSDTTDVTSDVSSDRAAVEADGAEAGATRRRRSGTGLSGMLLPELQSLAASLGISGTARM
RKGELVTAIQERQSGESRPAAAAAPARTTARAEARTEAPEQEWPSATQGAAEAPVARSPR
RATRAAGPPEPRAAAAAPAAEAHAAEQAPAAVEKSATVEKAAEPAAEKTERPTRASRAER
AAATADRAERTERAERPERAERTERVERTDRAERAERTAERGERTERADRTERADRAERT
DRAERGERNDRGERGGERADRNSGDRGERAGGDRNQRGSFNQAEDDGDDDGTGRRGRRSR
FRDRRRGRDRDGDQLQPTGAAGARGGNEPQVSEDDVLVPVAGILDVLDNYAFVRTTGYLS
GSNDVYVAMSQVKRYGLRRGDAVTGAVRQPRDGEQRRDKYNPLVRLDTVNGMDPEEAKRR
PEFYKLTPLYPQDRLRLETEPHILTTRVIDLVMPIGKGQRALIVSPPKAGKTMVLQSIAN
AITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPTDHATVAELSIERAKRL
VELGHDVVVLLDSITRLGRAYNNASPASGRILSGGIDSTALYPPKRFLGAARNIENGGSL
TIIATALVETGSTGDTVIFEEFKGTGNAELKLDRKIADRRIFPAIDIDPSGTRKEEILLA
PDELAIVIKLRKVLHALDSQEALNLLLDRLKKTRTNVEFLMQIAQTTPGE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtcacgtcggatgtctcgagcgaccgcgccgcggtcgaggcc
gacggcgccgaggccggggcgacgcgtcggcgccgctcgggcaccgggttgtccggcatg
ctgctgcccgagctgcagagcctggccgcctcgttgggcatctccggcaccgcgcggatg
cgcaagggcgagctcgtgacggcgatccaggagcgtcagtccggcgagtcgcgcccggcc
gccgcggcggcgccggcgcggaccaccgcccgggccgaggcgcgcaccgaggcgccggag
caggagtggccgtccgccacccagggcgccgccgaggcgccggtcgcccgttcccctcgc
cgggccacccgggccgccgggccgccggagccgcgcgccgccgcggccgccccggccgcc
gaggcgcacgccgctgagcaggcacccgccgcggtcgagaagtccgccacggtggagaag
gccgccgagccggcggccgagaagaccgagcgtccgacccgggccagccgtgccgagcgg
gccgcggccaccgccgaccgggcggagcggaccgagcgcgccgagcgcccggagcgggcc
gagcgcaccgagcgggtcgagcgcaccgaccgggcggagcgcgccgagcgcaccgccgag
cgcggcgagcgcaccgagcgggccgaccgcaccgagcgggccgaccgcgcggagcggacc
gaccgggccgagcggggcgagcgcaacgaccgcggtgagcggggtggcgagcgcgccgac
cgcaacagcggcgaccggggcgagcgcgccggcggcgaccgcaaccagcgcggcagcttc
aaccaggccgaggacgacggcgacgacgacggcaccggccggcgcgggcgccgcagccgg
ttccgggaccgccgccgcggccgtgaccgcgacggcgaccagctgcagcccacgggtgcg
gccggcgcgcggggcggcaatgagccgcaggtcagcgaggacgacgtcctggtgccggtc
gccggcatcctcgacgtgctcgacaactacgcgttcgtgcggaccaccggctacctgtcc
ggctccaacgacgtgtatgtcgccatgtcgcaggtcaagcggtatgggctgcgccgcggc
gacgcggtcaccggtgccgtgcggcagccgcgcgacggcgagcagcggcgcgacaagtac
aacccgctggtgcgcctcgacacggtcaacggcatggatccggaggaggccaagcgccgc
cccgagttctacaagctgaccccgctctacccgcaggaccgcctgcggctggagaccgag
ccgcacatcctgaccacccgcgtcatcgacctcgtcatgccgatcggcaaggggcagcgg
gcgctcatcgtgtcgccgccgaaggccggcaagacgatggtgctgcagtcgatcgccaac
gcgatcacccgcaacaaccccgagtgccacctgatggtcgtgctggtcgacgagcggccc
gaagaggtcaccgacatgcagcggtcggtcaagggcgaggtcatcgcctcgacgttcgac
cgcccgccgacggaccacgccacggtcgcggagctgtcgatcgagcgggccaagcggctc
gtcgagctgggccacgacgtggtcgtgctgctcgactcgatcacccggctcggccgcgcg
tacaacaacgcgtcgccggcctcgggccgcatcctgtccggtggtatcgactcgacggcg
ctgtacccgccgaagcggttcctcggcgcggcccgcaacatcgagaacggcggctcgctg
acgatcatcgccacggcgctcgtcgagaccggctcgaccggtgacacggtcatcttcgag
gagttcaagggcaccggcaacgccgagctcaagctcgaccggaagatcgccgaccggcgc
atcttcccggcgatcgacatcgacccgtccggcacccgcaaggaagagatcctgctggcg
cccgacgagctcgcgatcgtcatcaagctgcgcaaggtgctgcacgccctcgactcgcag
gaggcgctcaacctgctgctggaccggctgaagaagacccggaccaacgtcgagttcctc
atgcagatcgcccagaccacgccgggcgagtaa
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