Dactylosporangium aurantiacum: Daura_12240
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Entry
Daura_12240 CDS
T08497
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
daur
Dactylosporangium aurantiacum
Pathway
daur03030
DNA replication
daur03430
Mismatch repair
daur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Daura_12240 (dnaE)
03430 Mismatch repair
Daura_12240 (dnaE)
03440 Homologous recombination
Daura_12240 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daur03032
]
Daura_12240 (dnaE)
03400 DNA repair and recombination proteins [BR:
daur03400
]
Daura_12240 (dnaE)
Enzymes [BR:
daur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Daura_12240 (dnaE)
DNA replication proteins [BR:
daur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Daura_12240 (dnaE)
DNA repair and recombination proteins [BR:
daur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Daura_12240 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UWZ56871
UniProt:
A0A9Q9IJP8
LinkDB
All DBs
Position
2704589..2708122
Genome browser
AA seq
1177 aa
AA seq
DB search
MADSFVHLHVHTEYSMLDGAARLKDMFKEANRLGMPAVAITDHGNMHGAYDFYKQAKAAG
VTPILGVEAYVAPESRLHKQRVKWGRPDQKDDDVSGSGGYTHKTIWARNKTGLHNLFRLN
SRASIEGHFVKWPRMDMEIIAEHAEGLMATTGCPSGEVQTRLRLDQFDEALKAAAKYQEI
FGKENYFLEVMDHGLDIERRVREGLTEISKRLGIPPVVTNDSHYTHQSQAEAHDVLLCVQ
TAANINDPNRFRFGGSGYYLKSADEMRAVDSSDLWQQGCRNTLVVAERVDIDGMFVERNL
MPRFPVPEGETEESFFRAEVARGMARRFPDGIDEEHQRQADYEADMIVKMGFPAYFLVVS
DFILWAKNQGIAVGPGRGSAAGSLVAYAMGITDLDPLPHGLIFERFLNPDRISMPDIDID
FDERRRGDVIRYVTEKWGEDRVAQIATFGTIKAKAAIKDSARVLGYPFAVGDRITKAMPP
AVMGKDIPLSGIFDPNHPRYSEAVEFRALYDSDPDVKKVVDTAKGIEGLIRQTGVHAAGV
IMSAEPLIEHVPLMRRDADGAIITQFDYPTCETLGLLKMDFLGLRNLTIIDDAVKNIERN
HGIKLDLLSLPLDDKAAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGANSHTNYALRKNGQQEMTPIHPELEEPLKEILGPTYGLIVYQEQVQRAAQKLAGY
TLGQADLLRRAMGKKKKEVLEKEFVPFRDGMRANGYSDEAIKKLWDVLVPFADYAFNKAH
TAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKMALYLSECRRMGIEVLPPDVNTSA
GPFTPVGKDIRFGLAAVRNVGTNVVEAIVRCRQAAPYKDFHDFLSKVDAVACNKKTVESL
IKAGAFDSMGHPRRGLLAIHADAIDAYADIKKNEAIGQFDLFGDAFASDDTGSAGPAMTA
AIPQIEWDKRELLTFEREMLGLYVSDHPLFGLESVLAKAADTAISSLSEDGSVSDGAVIT
LAGMLTGVQRRITKQGKPWASATLEDLGGAVEALFFPNTYELVGQYIAEDAIVVVKGRVD
RRDETPRLMAMDLSMPDVTAADENRPVVLSLPANRCTPPLVDRLKEILLNHPGKAEVHVK
LSHGSRITLLRLGPYHVNPTTALKGDLKALLGPNSFS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcgttcgtgcatctccacgtgcacaccgagtactccatgctcgacggagcg
gcgcggctcaaggacatgttcaaggaggcgaaccgtctcggcatgcccgccgtcgcgatc
accgaccacggcaacatgcacggggcgtacgacttctacaagcaggccaaggccgccggg
gtcacgccgatcctgggcgtggaggcctacgtggcgcccgagtcgcggctgcacaagcag
cgcgtcaagtgggggcggccggaccagaaggacgacgacgtgtccggctccggcgggtac
acgcacaagaccatctgggcgaggaacaagaccggcctgcacaacctgttccggctgaac
tcgcgcgcgtcgatcgaggggcacttcgtgaagtggccccggatggacatggagatcatc
gccgagcacgccgaggggctgatggcgaccaccggctgcccgtcgggcgaggtgcagacc
cggctgcggctcgaccagttcgacgaggcgttgaaggcggccgcgaagtaccaggagatc
ttcggcaaggagaactacttcctggaggtcatggaccacggcctcgacatcgagcggcgg
gtccgggagggcctgaccgagatctccaagcggctgggcatcccgccggtggtgaccaac
gactcgcactacacgcaccagtcgcaggccgaggcgcacgacgtgctgctgtgcgtgcag
acggcggcgaacatcaacgacccgaaccggttccggttcggcgggtccggctactacctg
aagtccgccgacgagatgcgcgccgtggacagctccgacctgtggcagcaggggtgccgc
aacacgctcgtcgtggcggagcgggtcgacatcgacggcatgttcgtcgagcgcaacctg
atgccgcgcttcccggtgccggagggcgagaccgaggagtcgttcttccgggccgaggtc
gcgcgggggatggcgcgccggttcccggacggcatcgacgaggagcaccagcgtcaggcc
gactacgaggccgacatgatcgtcaagatgggcttcccggcgtacttcctggtcgtgtcc
gacttcatcctgtgggcgaagaaccagggcatcgccgtcggcccggggcgtggctcggcg
gcgggcagcctcgtcgcgtacgcgatgggcatcaccgacctcgacccgctgccgcacggc
ctgatcttcgaacggttcctgaaccccgaccgtatctcgatgcccgacatcgacatcgac
ttcgacgagcgccggcgcggcgacgtcatccggtacgtgacggagaagtggggcgaggac
cgggtcgcgcagatcgccacgttcggcacgatcaaggcgaaggccgccatcaaggactcg
gcgcgggtccttggctacccgttcgcggtcggcgaccggatcaccaaggcgatgccgccg
gccgtgatgggcaaggacatcccgctgtcggggatcttcgaccccaaccacccgcggtac
tccgaggcggtcgagttccgcgccctgtacgacagcgaccccgacgtgaagaaggtcgtc
gacaccgcgaagggcatcgagggcctgatccgtcagacgggcgtgcacgccgccggcgtc
atcatgtccgccgagccgctgatcgagcacgtgccgctgatgcgccgcgacgccgacggc
gcgatcatcacgcagttcgactacccgacctgcgagacgctcgggctgctgaagatggac
ttcctcggcctgcgcaacctgacgatcatcgacgacgcggtcaagaacatcgagcgcaac
cacggcatcaagctcgacctgctgagcctgccgctggacgacaaggccgcctacgagctg
ctggcccgcggcgacacgctcggggtgttccagctcgacggcggcccgatgcgctcgctg
ctgcggctgatgaagcccgacaacttcgaggacatctccgccgtcctcgcgctgtaccgg
cccggcccgatgggtgccaactcgcacaccaactacgcgctgcgcaagaacgggcagcag
gagatgaccccgatccacccggagctggaggagccgctcaaggagatcctcggcccgacg
tacgggctgatcgtctaccaggagcaggtgcagcgcgccgcgcagaagctggccggctac
accctcggccaggccgacctgctgcgccgggccatgggcaagaagaagaaagaggtcctg
gagaaggagttcgtgccgttccgcgacggcatgcgggccaacgggtacagcgacgaggcc
atcaagaagctgtgggacgtgctcgtcccgttcgccgactacgcgttcaacaaggcgcac
acggccggctacgggctggtgtcgtactggacggcgtacctgaaggcgaactacccggcg
gagtacatggccgggctgctgaccagcgtcggcgacgacaaggacaagatggccctgtac
ctgtcggagtgccggcgcatgggcatcgaggtgctgccgccggacgtcaacacctccgcg
ggcccgttcaccccggtcggcaaggacatccgcttcggcctggccgccgtgcgcaacgtc
ggcaccaacgtcgtcgaggcgatcgtgcggtgccggcaggccgcgccgtacaaggacttc
cacgacttcctgtccaaggtcgacgcggtggcctgcaacaagaagaccgtcgagtcgctg
atcaaggccggggcgttcgactcgatggggcacccgcgccgcgggctgctcgccatccac
gccgacgccatcgacgcgtacgccgacatcaagaagaacgaggcgatcggccagttcgac
ctcttcggcgacgcgttcgccagcgacgacacgggcagcgccgggccggccatgaccgcg
gccatcccgcagatcgagtgggacaagcgggagctgctcaccttcgagcgggagatgctc
ggcctgtacgtgtccgaccacccgctgttcgggttggagtcggtgctggcgaaggccgcc
gacaccgcgatcagcagcctctcggaggacgggtcggtttccgacggtgcggtgatcacc
ctggccggcatgctcaccggcgtgcagcggcgcatcacgaagcagggcaagccgtgggcg
tcggcgacgctggaggacctcggcggtgccgtcgaggcgctgttcttccccaacacctac
gagctggtcgggcagtacatcgccgaggacgcgatcgtcgtggtcaagggccgcgtcgac
cgtcgcgacgagacgccgcgcctcatggcgatggacctgtcgatgcccgacgtcaccgcc
gccgacgagaaccggccggtggtgctgtcgctgccggcgaaccggtgcacgccgccgctg
gtcgaccggctcaaggagatcctgctcaaccacccgggcaaggccgaggtgcacgtgaag
ctgagccacggctcgcggatcaccctgctgcggctcggcccgtaccacgtcaacccgacc
accgccctgaagggcgatctgaaggcgttgctgggccccaacagcttctcctga
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