KEGG   Dactylosporangium aurantiacum: Daura_14840
Entry
Daura_14840       CDS       T08497                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
daur  Dactylosporangium aurantiacum
Pathway
daur03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:daur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Daura_14840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:daur03400]
    Daura_14840
Enzymes [BR:daur01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Daura_14840
DNA repair and recombination proteins [BR:daur03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Daura_14840
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: UWZ57325
UniProt: A0A9Q9MJW2
LinkDB
Position
complement(3279999..3280964)
AA seq 321 aa
MSAADEERDGVALTNLDQQLFDDAGASKRDLVDYLDAVRDRIIPVLRGRPLSVVRMLRGQ
QPFMQKNLPKYTPDWVPRVTVWAESSKRNVTYGLCEDRRTLLWFANQRAIEFHPTLAKVP
DFAHTTHMILDLDPPAPDAFGLAVGAARLVRAVLRDLGMDSAVKTSGAKGLHVFVPIDAH
APMEDIAAATRAVAARAARLDPDLATTAFIREDREGKVFLDPTRVGGATVVAAYSPRLRP
GMPVSFPLSWDDLDDVTPADFTIHTVPGLLGDTDPWAARMPAPQRLDAGLIAEGHTIPVP
RVQAMHEGKRRAKAKREAENA
NT seq 966 nt   +upstreamnt  +downstreamnt
gtgagcgcagccgatgaggagcgcgacggggtcgcgttgacgaacctcgaccagcagctg
ttcgacgatgccggggcgagcaaacgcgacctggtcgactacctcgacgccgtccgcgac
cggatcatccccgtgctgcgcggcagaccgctgtcggtggtgcggatgctgcgcgggcag
cagccgttcatgcagaagaacctgccgaaatacacgccggactgggtgccgcgggtgacc
gtgtgggcggagtcgtcgaagcgcaacgtcacctacggactgtgcgaggaccggcggacg
ctgctgtggttcgccaaccagcgggccatcgagtttcaccccaccctcgccaaggtgccg
gacttcgcacacaccacccacatgatcctcgacctggacccgccggcccctgacgccttc
ggcctggccgtcggcgcggcgaggctggtccgcgccgtgctgcgcgacctgggcatggac
agcgccgtgaagaccagcggcgccaaggggctgcacgtgttcgtgccgatcgacgcccac
gcgccgatggaggacatcgccgccgcgacccgagccgtggccgccagggccgcgcggctc
gacccggacctcgccaccaccgcgttcatccgcgaggaccgcgagggcaaggtcttcctc
gatccgaccagggtcggcggggcgaccgtcgtcgccgcgtacagcccacggctgcggccg
ggcatgcccgtgtcgtttccgctgtcgtgggacgacctcgacgacgtcacgccggccgac
ttcaccatccacacggtgcccgggctgctcggcgacaccgacccgtgggccgcgcgcatg
ccggcgccgcaacggctcgacgctgggctcatcgccgaggggcacacgatccccgtgcct
cgtgtccaggcgatgcatgagggtaaacgacgtgccaaggccaaacgggaagcagagaac
gcctga

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