Dactylosporangium aurantiacum: Daura_29880
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Entry
Daura_29880 CDS
T08497
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
daur
Dactylosporangium aurantiacum
Pathway
daur00523
Polyketide sugar unit biosynthesis
daur01100
Metabolic pathways
daur01110
Biosynthesis of secondary metabolites
daur01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
daur00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Daura_29880 (rfbH)
Enzymes [BR:
daur01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
Daura_29880 (rfbH)
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Ortholog
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Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UWZ50994
UniProt:
A0A9Q9MCJ3
LinkDB
All DBs
Position
complement(6691857..6693167)
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AA seq
436 aa
AA seq
DB search
MADEVKQLILEQTRKLHRDRAAADQGFVPGVTPIMPSGAVLDEDDRAALVEQALEMRIAS
GATALRFERLFARAIGVRKAHLTNSGSSANLLAVASLGAPELGDQRLRRGDEVITVAASF
PTTVNPLLQHGLVPVFVDVDLGTYNTTVERVEAALSPKTRMVMMAHTMGNPFPVAEIRQL
CKDRGLFLVEDNCDAVLSTYQGRITGTFGDYSTVSFYPAHHLTMGEGGCILTDSLELARI
TESMRDWGRDCWCEPGQDNKCLKRFDYQMGDLPYGYDHKYIFSHVGYNLKATDIQAALGL
TQLTKLEDFVAARRRNWQRLRDGLDGTPGLLLPEATPGSEPSWFGFVITLTADAGFERRA
LVDFLQSRNIGTRLLFAGNLARQPAYRGEPYRVSGTLENSDIITERTFWIGVFPGVTAEM
IDYMVSSIREFAQRRH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaggtcaagcagctcatcctggagcagacccgcaaactccaccgcgaccgg
gcggcggccgaccagggcttcgtgccgggggtcacgcccatcatgccgtccggcgccgtc
ctcgacgaggacgaccgagccgccctggtcgaacaggccctggagatgcgcatcgcctcc
ggcgcgaccgcgctgcgcttcgagcggctcttcgcccgggcgatcggcgtgcgcaaggcg
cacctgaccaactccggctcctcggccaacctcctcgcggtcgcctcgctcggcgcgccg
gagctcggcgaccagcggctgcgccgcggcgacgaggtgatcaccgtcgcggccagcttc
ccgacgacggtgaacccgctgctgcagcacggcctcgtgccggtcttcgtcgacgtggac
ctcggcacctacaacaccaccgtcgagcgggtcgaggcggcgctgagcccgaagacccgc
atggtcatgatggcgcacacgatgggcaacccgttccccgtcgcggagatccggcagctg
tgcaaggaccggggcctgttcctcgtcgaggacaactgcgacgcggtgctgtccacgtac
cagggcaggatcaccggcacgttcggcgactactcgacggtcagcttctacccggcgcac
cacctgaccatgggggagggcggctgcatcctcaccgacagcctggagctggcgcgcatc
accgagtcgatgcgggactggggccgcgactgctggtgcgagccggggcaggacaacaag
tgcctcaaacggttcgactaccagatgggtgacctgccgtacggctacgaccacaagtac
atcttctcccacgtcggctacaacctgaaggcgacggacatccaggccgcgctgggcctg
acccagctgaccaagctcgaggacttcgtggccgcccgccggcgcaactggcagcggctg
cgcgacggcctggacggcacgcccggcctgctgctgccggaggcgaccccgggcagcgag
ccgagctggttcggtttcgtcatcaccctcaccgccgacgccgggttcgagcggcgggcg
ctggtggacttcctgcagtcgcgcaacatcggcacccggctgctgttcgccggcaacctg
gcccggcagccggcgtaccgcggcgagccgtaccgggtgagcggcaccctggagaacagc
gacatcatcaccgagcggacgttctggatcggcgtcttcccgggcgtcaccgccgagatg
atcgactacatggtgtcctcgatccgcgagttcgcgcagcgccggcactga
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