Desulfurella acetivorans: DESACE_00545
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Entry
DESACE_00545 CDS
T03007
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dav
Desulfurella acetivorans
Pathway
dav03410
Base excision repair
dav03430
Mismatch repair
dav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DESACE_00545
03430 Mismatch repair
DESACE_00545
03440 Homologous recombination
DESACE_00545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dav03400
]
DESACE_00545
DNA repair and recombination proteins [BR:
dav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DESACE_00545
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DESACE_00545
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DESACE_00545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AHF96509
LinkDB
All DBs
Position
109272..110897
Genome browser
AA seq
541 aa
AA seq
DB search
MNEDFCNIENKKVKIGNTYTYLALVRILKNRNISDIDKFLRPSLSHLYDPFLLSDMDLAV
ARTVRSLIAKERICIVGDYDVDGITACSILIKFFQEIGANITYYIPKREDGYGLSLSAIK
YAHQKKAKLIITVDNGISSQDEIEFAKQLGIDVIITDHHEPNTVPNAYAVVNPKMKNSKY
PFSELAGVGVAFNFLLALRKTLRERNFFTKEPNLANYLDLVSLGTLADVVPLVDVNRVFV
KYGLSKSSKALDKLKAVSNISSNLSTYDVAYKIAPRINSAGRLADANLAIDLFTTTQEIK
MLKIANWLDELNIKRKRLQQTILQEAKSIVAGAKHYDAIVVSGKWHKGVIGIVAGNLAHF
YRKPSIVISEDNYLCVGSGRSIESINLFEIVKRHENLLDKFGGHKLAVGLTLKKEHIEPF
REAINKEVSRLKVNASYKLRVDLSCNINIFDNIDFLENLRELEPFGAGHEEPTFFVRGGI
LKDIQKKPYHNILFFDFNGKSKSFVSTDADNLKINECYSIAFYITFNKAYYNFTIKDIFK
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
attaatgaagatttttgcaatatcgaaaataaaaaagtaaaaattggcaacacgtataca
tatcttgctcttgtaaggatcttaaaaaatagaaatatctcggatattgacaaattttta
agaccatcactatcgcacctatacgacccatttttactaagtgatatggatttagctgta
gctcgcactgttaggtctcttattgcaaaagagcgtatttgcattgtaggtgattatgat
gttgatggaataactgcttgttcaatactcataaaattttttcaagaaattggcgcaaac
ataacatattatataccaaaaagagaagatggctacggtttatcgctttctgctataaaa
tacgcacatcaaaaaaaagcaaaattaattataaccgtagataacggtatttctagccag
gacgaaatagaatttgcaaaacaattgggtatagatgtaattataacagatcaccatgaa
ccaaatactgtacccaatgcatatgccgttgtaaatccaaagatgaaaaattccaaatac
ccctttagtgagcttgcaggagtaggtgttgcatttaattttttactcgctttgagaaaa
acattgagagagagaaatttttttacgaaagagccaaatcttgcaaactatttagatctt
gttagtttgggcacacttgctgatgttgtaccacttgttgatgttaatagggtttttgta
aagtatggcctatcaaaaagctcaaaagcattggataaattaaaagctgtttcaaatatc
tcaagcaatttaagtacttatgatgttgcatacaaaatagcgccaagaataaattctgct
ggtaggcttgccgatgctaatcttgcaatagatttgtttacaacaacacaagaaattaag
atgctaaagatagcaaactggctagatgagttaaatataaaacgaaaacgcctgcagcag
acaattttacaagaagcaaaatcaatagtagcaggtgcaaaacattatgatgcaattgta
gtcagtggtaagtggcataaaggagtaattggtatagtagcaggaaaccttgctcatttt
tatagaaagccttccattgttatatcagaagataattatttatgtgttggaagtggaaga
agtatcgaatctataaatctctttgaaattgtaaagcgtcatgaaaacttgcttgataag
tttggtggtcataaattagctgttgggcttacacttaaaaaggaacatatagaaccattt
agagaagctatcaacaaagaagtctcaagacttaaagtaaacgcttcttacaagcttaga
gttgatttatcctgcaatataaacatttttgataatattgattttttagaaaatctaaga
gaacttgaaccatttggcgcagggcatgaagaaccaacattttttgtaagaggcggtatt
ttgaaagatatacagaaaaaaccttaccataatattcttttttttgatttcaatggcaaa
agtaaatcgtttgtgtcaacagatgccgataacttaaaaataaatgagtgctacagtata
gctttttatataacttttaataaagcgtattacaactttacaataaaagatatatttaag
gagtaa
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