| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
dav Desulfurella acetivorans
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:dav00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DESACE_01805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:dav03021]
DESACE_01805
03400 DNA repair and recombination proteins [BR:dav03400]
DESACE_01805
Enzymes [BR:dav01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DESACE_01805
Transcription machinery [BR:dav03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DESACE_01805
DNA repair and recombination proteins [BR:dav03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DESACE_01805
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
342538..346614
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| AA seq |
1358 aa
MVQPLCLDYRLRVNFAQTQEVLSVPDILNMAIESYNRFLQKGSDFEKTLENAFKEIFPIE
DVHGKIKLEYVDYYLREAKYNPMICKLKGITYGASLMLKVKLTLWDIDASGNKIGVKDIK
EQEIYVCELPLMSESGSFIINGVERVIVNQLHRSPGVIFKNLTQQKENNYYAQVIPEKGS
WIEFETDNKNLLHIRIDRKKKFPATVILKALGFSDLDILNRIYKVLNIHVKDGNFYTKPD
KKLQGFKVKEDIVVENEVIVQKQKKLTPKIISRLIDLDINEIVIDENEFLDKYIAEKIDN
NGSVIEGLSLIDSKVLQELKLMGNFNFKLVYSEYDDYMIINTLKADHEVLQKRRIGLKED
LPIEDIAKIYLHKSLRPGEHSSVEEANKFFAGLFFDPLKYDLSIEGRAKINETLNIDIPK
DIRVLTVDDFFGIINHIILFKNGKVSADDMDSLSNRRVHLVGELLYSEVRKGLYRMQRLI
KDRLLMPKETEDLTPYDVINTKPVATAIKDFFATGQLSQFLDQTNILSEISHKRRLSALG
PGGLTRERAGFEVRDVHPSHYGRLCPIETPEGPNIGLIVSFSIYARVNEFGFIETPYRIV
ENGKVTDKIVYMTAGKEKDHIIAQASVDLNPDGTFAQDYVPSMKNGEFIMAYKMDVNLMD
VSPRQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPLIAPEAPLVGTGMEKEVGTYSRH
AVLAKRDGKFIRIESNKIYIAVQSQEGAYEIDKYDLNNFVRSNQDTCFSQKPIVKIGDYV
KKGQVIADGPTMDKGELALGRNMVVAFVPWRGYNYEDGITISRRVVEEDLFTSIHIKEFE
VYARDTKLGPEEITADIPSASAELIKNLDKNGIVRIGAYVKPGDILVGKVTPKAETHYSP
EERLLRAIFGEKASNVSDSSLRVPSDTEGTVIDVRIFRRKGTEKLAREEYIQKEDIKKIN
EELKTQLHLLENLKLESYKKLLEEETLEKDLSLQDIVYKKGSKLDKCALDALDENQIKEL
LSPKNKLKAKEIEKHYKKISKALKDEYAKKIKEIDKEDELPPSVIMSVKVFIATKRKLSV
GDKMSGRHGNKGVVSRILPVCDMPFMEDGRPVDVVLNPLGVPSRMNLGQILETHLGWISK
GLGKKINELIKEEKKDVLKQYLKQIFLGNADKFIDSLSDEMLDRYVKEWKNGVYFAAPVF
EGPKEKDFDYYKKLLGIDTFKSTLYDGLTGEKFIEPVTVGVMYILKLHHLVDDKVHARSV
GPYSLVTQQPLGGKAHFGGQRFGEMEVWALEGYGAAYTLQEMLTVKSDDVSGRSKMYEAI
VKGKPVLLGGIPESFNVLVKELQSLGLDIELLKDVRRR |
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| NT seq |
4077 nt +upstreamnt +downstreamnt
atggtgcagcctctttgcttagattataggttaagagtcaattttgctcaaactcaagaa
gtgttatctgtgccagatattttaaacatggctatagaatcatacaatagatttttacaa
aaaggaagtgattttgaaaaaacattagaaaatgcatttaaagaaatttttccaattgaa
gatgttcacggaaaaatcaaattagaatacgttgattattacctacgagaagctaaatat
aaccctatgatttgtaaacttaaaggtataacatatggtgcttctttaatgctcaaagta
aaactaacgctttgggatattgatgcttctggtaataaaattggggttaaagatataaaa
gaacaagaaatttatgtatgtgaacttccattaatgagtgaatcaggaagttttattata
aatggtgttgaaagagttatagtaaatcaactacataggtctccaggtgtaatttttaaa
aatttaacccaacaaaaggaaaataattattacgctcaagtaatacctgaaaaaggtagt
tggattgaatttgaaactgataataagaatcttctacatataagaatagatagaaaaaag
aaatttccagcaactgttatactaaaagctcttggttttagcgatttggatattttaaat
agaatttacaaagtgctaaatatacatgtaaaagatgggaatttttatacaaagcccgat
aaaaaattacagggctttaaagttaaagaagatattgttgtagaaaacgaagtgattgtt
caaaagcaaaaaaaacttacaccgaaaattatttcacgtttaatagatttagatataaac
gaaattgtaattgatgaaaacgagtttttagataaatatatagctgaaaaaattgacaat
aatggctctgtaatagaagggctttctttaatagattctaaggttttacaagaattaaaa
ttaatgggaaactttaactttaagcttgtatatagtgaatatgatgattacatgattatt
aatacgcttaaagcagatcatgaagttttgcaaaaaagaaggattggtctaaaagaagat
ctacctattgaagacattgcaaaaatttatcttcataaatctttaagacctggtgagcat
tcttctgttgaagaggctaataaattttttgctggtttgttttttgatcctttgaagtat
gatttgtcaatagaaggtagggctaagattaatgaaacactaaatatagatataccaaaa
gatattagagtattaacggttgatgatttttttgggataattaatcatataatcttgttt
aaaaatggtaaagtttcagcggatgatatggatagcctttcaaatagaagagttcattta
gtaggtgagcttttatattcagaagttagaaaaggtttatatagaatgcaaaggctaata
aaagatagacttttaatgccaaaagaaacagaagatttaacaccatatgatgtaattaat
acaaaacctgttgcaaccgcaattaaagacttttttgcaacaggacagttgtctcaattt
ttagatcaaacaaatatactatctgagatttctcacaagagaagactgtcggctttagga
ccaggcggtttaacacgtgagagagcaggttttgaagtccgcgatgttcacccatcccat
tatggaagactttgtccaatagaaacaccagaagggccaaatataggcttaattgtttcg
ttttcaatatacgctagggtaaacgagtttgggtttatagaaacaccatatagaatagta
gaaaatgggaaggttacagataaaattgtttatatgacagcaggcaaagaaaaagaccac
ataattgcacaagccagtgttgatttaaatcctgatggcacatttgcccaagattatgta
ccgtcaatgaaaaacggtgaatttattatggcatacaaaatggatgttaacctgatggat
gtatctccaagacagattgtttccgttgcggcgagcttgataccatttttggaacacgat
gatgcaaatagagcacttatgggttcaaacatgcagcgtcaagctgtcccacttattgct
cctgaagctccacttgtgggtacaggcatggaaaaagaagtaggaacatactcaaggcat
gcagtgcttgctaaaagagatggtaaatttataagaatagaaagcaacaaaatttatata
gcagtgcaatcacaagaaggagcttatgaaatagataaatatgatttaaataattttgtc
agatcaaaccaggatacatgtttttcgcaaaaaccaattgtaaaaattggtgattatgtt
aaaaaaggtcaggttattgcagatggtcccaccatggacaaaggagagcttgcgcttgga
agaaatatggttgtagcttttgtaccatggcgtggatacaactatgaagatggtataaca
atttcaagacgtgttgtcgaagaagatttgttcacatctatacatataaaagagtttgaa
gtttatgcgcgcgatactaaacttggaccagaagaaataactgctgatattccaagtgca
tctgctgagttaattaaaaatttagacaaaaatggcatagtaagaattggtgcctatgta
aaacccggagatatccttgttggaaaagttacaccaaaagcggaaacccactattcccca
gaagagaggcttttaagggcaatttttggtgaaaaagcctctaatgtgtcagattcgtcc
cttagagttccatcagatacagaaggcactgtgattgatgttagaatttttaggcgaaaa
ggcaccgaaaaactagcacgtgaagagtatatacaaaaagaggatataaaaaagataaat
gaagaactaaaaactcaactgcaccttttagagaacttaaaactagaatcatacaaaaaa
ttgttggaagaagaaacattagaaaaagatttgtctttgcaggatattgtttacaagaaa
ggcagcaaattggataaatgtgcgcttgatgctttggatgaaaatcaaattaaagaattg
ctatccccaaaaaacaagttgaaagcaaaagaaatagaaaaacactataaaaagatatct
aaagctttaaaagatgagtatgctaaaaaaataaaagaaattgataaagaagatgaattg
ccgccaagtgtaataatgagcgtaaaagtttttattgcaacaaaaagaaaattatccgtt
ggcgataaaatgagtggtagacacggtaacaaaggtgtggtttcacgaatattgccggta
tgtgatatgccttttatggaagatggtaggccggttgatgttgtattaaatccattaggc
gtaccttcgaggatgaatttagggcaaattcttgagactcatttgggttggatatctaaa
ggtttgggtaaaaaaattaatgagctaataaaagaagaaaaaaaagatgtactaaagcaa
tatttaaaacaaatatttcttggcaatgctgataaatttattgatagtctaagcgatgag
atgcttgataggtatgttaaagaatggaaaaacggtgtgtattttgcagctcctgtattt
gaaggtccaaaagaaaaagattttgattattataaaaagcttttaggcattgataccttt
aaatcaacactctatgacggcttaactggtgaaaaatttatagaacctgttactgttggt
gttatgtatatattaaaactacaccatttagtagatgataaagttcatgcaaggagcgtg
gggccatactcgcttgttacacaacagcctcttggaggtaaggcacattttggcggacaa
agatttggagagatggaagtatgggctttagaaggctatggagctgcatatactttgcag
gaaatgcttactgtaaaatccgatgatgtaagtggtaggagtaaaatgtacgaagcaata
gtaaaaggtaaacctgtattgcttggtggtattcctgaatcgtttaatgtacttgttaaa
gaattgcagtctttgggtttggatatagaacttttaaaagatgttagaagaagatag |
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