Desulfurella acetivorans: DESACE_02210
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Entry
DESACE_02210 CDS
T03007
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dav
Desulfurella acetivorans
Pathway
dav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DESACE_02210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dav03019
]
DESACE_02210
Messenger RNA biogenesis [BR:
dav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DESACE_02210
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Exonuc_VII_L
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AHF96754
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All DBs
Position
415101..416654
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AA seq
517 aa
AA seq
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MSMILFSVLTLILGLLIGYLGVYFLQIKKKEYLKQKAEDIIKNAEIEKDNMLKKAEIDIK
DYTLTAKNQIDEEIREKRKEIQKWEKRLQMKEETLDKKQLQLDSKQEQLNKKLEELKEKE
QFLDEESAKLTSLLEEQKRKIEEIARMTTEDAKEYLIKQIEDVAKKEAVVRLREIEEEVN
ENAKKISQKILSLTMEKMASTFVMEKTISTVSLPNDEMKGRIIGREGRNIRSFEKETGVD
LIIDDTPEVVVISSFDPKKREIAKVALEKLIQDGRIHPARIEEVVEKVKQELEQEAIEEV
KSLIFDLGIENLHPEIIKHLSMLKYRTSYTQNVLQHSVEVAYMAGIMAAELGLNIKLAKR
AGLLHDIGKSTDQEMEGSHTTIGAEIARKYGENEYVINAIMSHHGEVEPNCVESVLVSIA
DTLSAARPGARMEVLENYIKRLEELEKIAKKYKNVKNAYAIQAGRELRVIIEDQFTSDND
AYLVAKEIAEEIKENMTYTGQVKVVTIRELRAVEYAN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgatattatttagtgttttaacattaatattaggtcttttaataggttatctt
ggtgtttattttctgcaaatcaaaaaaaaggagtatttaaaacaaaaagctgaggatata
atcaaaaatgcagaaattgaaaaagataacatgttaaagaaagccgaaattgatattaaa
gattatacacttacagcaaaaaaccagattgatgaagaaatcagagaaaaaagaaaagaa
attcaaaaatgggaaaaaagacttcaaatgaaagaagagactttagacaaaaaacaactt
caacttgatagtaaacaggaacagttaaataaaaaattggaagaacttaaagaaaaagag
caatttttagacgaggaaagtgctaaacttacaagtttactcgaagaacaaaaaagaaaa
attgaagaaattgctagaatgactactgaagatgctaaagaataccttatcaaacaaatt
gaagatgttgcaaaaaaagaagctgttgtaagacttagagaaatcgaagaagaagttaat
gaaaatgcaaaaaaaatttcgcagaaaatactaagccttaccatggaaaagatggcaagc
acgtttgtaatggaaaaaacaatatctactgttagtttgccaaatgatgagatgaaagga
agaattataggcagagaaggcagaaatattaggtcctttgaaaaagaaaccggtgtagat
ttaatcatcgatgatactccagaagttgttgtaatatcaagttttgatccaaagaaaaga
gaaattgctaaagttgctttagaaaagttgatacaggatggtagaattcacccggctcgc
atagaagaagttgttgaaaaagttaaacaggagctagaacaggaagctattgaagaggtt
aaatctttaatattcgatttaggtatagaaaatttacatccagagattattaagcatttg
tcaatgttaaaatataggacgagctatacgcaaaatgttttacaacattctgtggaggta
gcctacatggctgggattatggcagccgagcttgggcttaatataaaattagctaaaagg
gcaggtcttttgcatgatataggaaaatctacggatcaagaaatggaaggctcacataca
acaattggggcagaaatagcaagaaagtacggagaaaatgagtatgttataaatgctatt
atgtctcatcatggtgaggtagagcccaactgtgttgaaagtgttcttgtttcaattgct
gatactttgagcgcagcaagacccggtgctagaatggaagtacttgaaaactatattaag
cgattggaagaattggaaaaaattgctaaaaaatacaagaatgtcaaaaatgcatatgca
attcaagctggcagagagctaagagttataattgaagatcaatttacaagcgataatgat
gcttatcttgtcgcaaaagagattgcagaagaaataaaagaaaacatgacttatactgga
caggttaaagtagtaacaattagagaattaagggctgttgagtatgcaaactga
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