KEGG   Desulfurella acetivorans: DESACE_04145
Entry
DESACE_04145      CDS       T03007                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
dav  Desulfurella acetivorans
Pathway
dav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DESACE_04145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dav03400]
    DESACE_04145
DNA repair and recombination proteins [BR:dav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DESACE_04145
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DESACE_04145
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 AAA AAA_16
Other DBs
NCBI-ProteinID: AHF96981
LinkDB
Position
787369..789345
AA seq 658 aa
MIYKLHSDYKPTGDQPHAIKNLSENIKKGIKFQTLIGVTGSGKTFTIANVIKNIDKPVLV
ISHNKTLASQLYTEFANFFPENAVEYFISYYDYYQPEAYVPRTDTYIAKDSSINDEIDRL
RQKATMSLLTRKDVIVVASVSCIYGIGEKEDYEGMSFKINVGDKLNIRKFLEILVELLYK
RNDIDFERGNFRVRGDIVDVYLSYFKNMALRVEFFDDTIEKISIFDPLTARLIEKKDSAV
IFPASHYVSTKQKRDIAIHRIREELRERIQYFKSQNKLLEAQRIEERVNFDLEMIEQTGT
CSGIENYSIHFSNRLPGEPPISLIDYFNKNFLLIIDESHVTIPQIKGMYEGDYSRKKTLV
DYGFRLPSALDNRPLKFDEFMQKIDQVIFVSATPSDFELELSRPYIIEQIIRPTGLMDPE
IIVKPMDNAIDDLFSEIKNSTKAGYKVLVTTLTKKMAEDVSEYYNNLGLRVKYMHSEIDA
IERAKIIWDLRNNKFDCLVGVNLLREGLDIPEVNLVAILDADKEGFLRSKTSLIQTAGRA
ARNATSKVIFYANNITKSMQEAINETLRRRKIQEDYNIKNNITPTTIIKNKNSKVLEMCD
LDYLENPQIDNVKKKDIPKIISKLYRQMKEASQKMEFEKAIEYRNEIERLKKLDMELV
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgatatataagcttcactcagactataaacccacaggcgatcagccacatgcaataaaa
aatttaagcgaaaatataaaaaaaggcattaaatttcaaacattaattggtgtaacggga
agtggtaaaacttttacgatagcaaatgtgattaaaaatattgataaacctgtacttgtt
atttcacacaataaaactcttgcaagtcagctttatacagaatttgcaaatttttttcca
gaaaatgcagttgaatactttatcagctattacgattattatcagccagaagcatatgta
ccaagaacagacacatatatagccaaagactcatccataaacgacgaaatagatagacta
aggcaaaaagctacaatgagtttacttacaagaaaagatgttattgttgttgcaagtgtt
tcttgtatttacggtataggcgaaaaagaagactatgaaggtatgtcttttaaaattaat
gtaggagataaactaaacataagaaaatttttggaaattttagttgaacttttgtataaa
agaaacgatattgattttgaaaggggtaattttcgcgtaagaggagatattgttgatgtt
tacttgtcatactttaaaaatatggcgctgagagttgagttttttgacgatacaattgaa
aaaatatcaatttttgacccacttacagccaggttaattgaaaaaaaagattctgctgta
atttttccagctagccattatgtatcaacaaagcaaaaaagagatatagccattcacaga
atcagggaagagctaagagagcgtattcaatactttaaatctcaaaataaacttttggaa
gctcagcgtatagaagaaagggttaattttgatcttgaaatgattgaacaaacaggtaca
tgcagtggtattgaaaattactctatccatttttcaaatagactaccaggtgagcctcct
atatcattaattgattattttaataaaaactttttactcataatagatgagtctcatgtt
acaatacctcagataaaaggtatgtatgaaggcgattattctagaaaaaaaacacttgtt
gattatggttttagacttcctagtgcattagataatagaccgcttaagtttgatgaattt
atgcaaaagatagaccaggtaatatttgtttctgctacgccttctgattttgaacttgag
ctttcaaggccgtacattatagagcaaattatacgcccaactggtcttatggatccagaa
attattgtaaagccaatggataatgccatagacgatttattttctgaaattaaaaatagt
acaaaagcaggctacaaagtgctagttaccacacttacaaaaaaaatggcagaagatgtt
agtgaatattacaataatttaggtcttagggtaaaatatatgcattcagaaatcgatgcc
atagagcgcgctaaaattatatgggatttaagaaacaataaatttgattgtttggtaggt
gttaacttgctaagggaaggccttgatataccagaagtaaatttagtggcaatattagat
gcagataaagaaggttttttaagaagcaaaacaagtcttatacaaacagcaggaagagca
gccagaaacgctacatccaaagtaattttttatgctaataatattacaaaatctatgcaa
gaagctataaatgaaacattaagaagaagaaagattcaagaagactataatattaaaaat
aatataaccccaaccacaataataaaaaataaaaatagcaaagttttagagatgtgtgat
ttagattatttagaaaatcctcaaattgacaatgtaaaaaagaaagatataccaaaaatt
atcagcaaactttatagacagatgaaagaagcatcccagaaaatggaattcgaaaaggca
attgagtatagaaacgagattgaaagattaaagaaacttgacatggagttggtttag

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