Desulfurella acetivorans: DESACE_04970
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Entry
DESACE_04970 CDS
T03007
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dav
Desulfurella acetivorans
Pathway
dav03420
Nucleotide excision repair
dav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DESACE_04970
03430 Mismatch repair
DESACE_04970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dav03400
]
DESACE_04970
Enzymes [BR:
dav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DESACE_04970
DNA repair and recombination proteins [BR:
dav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DESACE_04970
MMR (mismatch excision repair)
Other MMR factors
DESACE_04970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
DUF3502
DEAD
SBBP
Sgo0707_N2
ResIII
ERp29
Motif
Other DBs
NCBI-ProteinID:
AHF97941
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All DBs
Position
complement(954171..956105)
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AA seq
644 aa
AA seq
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MFDSLNDQQKKAVEICDKNLLIIAGAGSGKTKTLTYKIAYILKNNLAKPWEILALTFTNK
AADEMKDRVANILDTSIDNFYIGTFHALSLRFLRQIGKKYTIYDKHDQEMLVKEIITYLN
LDKNKFQPSKVASYISKIKNSSNLEFPTKEFERIYKIYEEKLESNNAVDFDNILIKFIEE
LKNNDKLRQNFQNQFKFILIDEYQDTNNIQYELIKEFYNGDNRIFAVGDEDQSIYAFRGA
NINNILSFSNDFLPCEIIKLEKNYRSTKNILNIANTIITHNKTRIGKNLYSDISGVEPVI
KEFATNKDEAYFVSNQIKNILMQNDNSSIAVLYRNNNLSRIFEEYFMQFGIAYKKIGAHK
FFDKKEIKDILSFIKIAYNEKDDVSFIRSIGNFGGIGLKTIDDIKKIAIDLNTNLFIAAS
TLTQKKYAKVARFIEFVKILQKKLEFGNISECLKFVFDEVFSDKNFYRQDIRQSNIGELI
EFAKNMDIESFMENASLYDYSQSIDGENNLSLPNVSLMTIHAAKGLEFDHVFIVGLNEGI
LPSLYQDSVIEEERRIMYVGITRAKKTLYLSYYLSDFHNSFIPSRFLKEIAVNKTQLKRY
RIGETINHKDFGKGIILNVKEKPLELKVNFFKYGLKILTENDIF
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattcgctaaacgatcaacaaaaaaaagcggttgaaatttgtgataaaaattta
cttattattgctggtgccggcagtggtaaaacaaaaactttaacatataaaatcgcttat
attttaaaaaataatttagccaaaccttgggaaatattggctttgacatttacaaataaa
gctgcagatgaaatgaaagacagagtagcaaatattttggatacgagtatagataatttc
tacattggtacatttcatgcattatcattgagatttttgcgccaaattggcaagaaatac
acaatctatgacaaacatgatcaagaaatgcttgtaaaagaaattataacataccttaat
ttagataaaaataaattccaaccttctaaagttgcatcatatatttctaaaataaaaaat
tcttcaaatttagaatttccaacaaaagaatttgaaaggatttataaaatttatgaagaa
aaacttgaaagtaataatgctgttgattttgataatatattgataaagtttatagaagaa
ctaaaaaataacgataaattaaggcaaaattttcaaaatcaattcaaatttatcttaatt
gatgagtatcaggatacaaataatatacaatatgaattaataaaggaattttataatgga
gataatcgcatttttgcagtaggcgatgaagatcagtcaatttatgctttcagaggcgca
aatatcaataatattttatcttttagcaatgactttttgccatgcgagattataaaactg
gaaaaaaattaccgctcaacaaaaaatatacttaacattgcaaatactatcataacacat
aataaaacacgtataggaaaaaatctttattctgatatttctggagtagaacctgttata
aaggaatttgcaacaaataaagatgaagcttactttgtatcaaatcaaataaaaaatatt
ttaatgcaaaatgataattcaagcatagcagttctttataggaacaataacctatcaagg
atttttgaagaatattttatgcagtttggtattgcttataaaaaaatcggtgctcacaaa
ttttttgataaaaaagaaataaaagacatattaagttttattaaaattgcgtataacgag
aaagatgatgtttcttttatccgttccattggaaattttggaggtattggcttaaaaaca
atagatgacattaaaaaaatagcaattgatttaaatacaaacctatttatagcagcaagc
acactcacgcaaaaaaaatatgcaaaagttgctagatttattgaatttgtaaaaattttg
caaaaaaaacttgaatttggtaatattagcgagtgtttaaagtttgtatttgatgaagtg
ttttcagataaaaacttttacaggcaagatataagacaatcaaatattggtgaacttatt
gaatttgcaaaaaatatggatattgaatcttttatggaaaatgcaagcttatatgattac
tctcaaagcatagatggagaaaataatttatctttgccgaatgtaagtcttatgacaatc
cacgcagctaaaggtttagaatttgatcatgtttttattgttgggctaaatgaaggtatt
ttgccaagcttataccaagattcagttatagaagaagaaagacgcataatgtatgtaggt
attacaagggctaagaaaactttatatttaagttattatttatctgattttcacaatagt
tttataccatcccgttttttgaaagagatagctgtcaacaaaactcaacttaaaaggtat
aggattggagaaaccattaaccataaggattttggcaaaggaattattttgaatgtaaaa
gaaaaaccattagaattaaaagtaaatttttttaagtatggtttaaaaattttaacagaa
aatgatattttttag
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