Desulfurella acetivorans: DESACE_06395
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Entry
DESACE_06395 CDS
T03007
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dav
Desulfurella acetivorans
Pathway
dav03030
DNA replication
dav03430
Mismatch repair
dav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DESACE_06395 (dnaE)
03430 Mismatch repair
DESACE_06395 (dnaE)
03440 Homologous recombination
DESACE_06395 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dav03032
]
DESACE_06395 (dnaE)
03400 DNA repair and recombination proteins [BR:
dav03400
]
DESACE_06395 (dnaE)
Enzymes [BR:
dav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DESACE_06395 (dnaE)
DNA replication proteins [BR:
dav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DESACE_06395 (dnaE)
DNA repair and recombination proteins [BR:
dav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DESACE_06395 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AHF97249
LinkDB
All DBs
Position
complement(1213338..1216982)
Genome browser
AA seq
1214 aa
AA seq
DB search
MPFVHLHNHSEYSLLDGATKLNAMVAKAKKDKQEYIALTDHGNMFGAVDFYKTCKASGIK
PIIGFESYVAENRFDRNKDTKGGFHLTLLAKSNEGYHNLLKLSTFSYTEGFYYKPRIDKK
LLKAYSEGIMAGSACLHGEINYYLLNNNYDLAKKACLEYQEIFGKDNFFIEIMRHDLPEQ
VQIEPLLLKLANETNAPIVATNDCHYLEKDDAKAQDVLLCIQTNKLIGDPDRMRMKTQEF
YFKTQEEMYDKFKDLKEAVDSSYLIASKSDIEIPVGQLIFPIYSKDFDTDDKKLKDLIDD
GFIKRFGRKGNSRLTDEQYEIYKQRLEYEFSVIRQMHFSGYFLIVWDFINYAKSKSIPVG
PGRGSAAGSLVSYCLGITDIEPIKNNLLFERFLNPNRISMPDIDVDFCIERRDEVIKYVL
KKYGFFNVAQVGTFGTLGARNVLKDVGRVMGMSFEETNRITKYIPDSNSTISEVESNNTE
FKKIADNNRELFKLSKTLEGCKRHFSIHAAGIVISREPIYKLCPLYKSDALSDTGILVTQ
YEKDILEDIGLIKFDFLGLKNLTVIDNALKMIKENEGVSIDWQNIDFNDSNVYKMLSNGH
VAGVFQLESSGMQGVLRELKPTCFEDLVAVLALYRPGPLGSGMVKDFIECKHGRQSVEYF
LPQLEPILKDTYGVIVYQEQVMQIANVLAGYTMSEADVLRKIMGKKQVEKIGHEREKFLA
RCRERNIESKKAEEIFSLMEKFAEYGFNKSHSTAYAYIAFQTAYLKYYYPEYFMCALMNG
DIGDPEQTQKYIEECTNMGIDILPPDINLSREYYSITKHNNRKAIRFGFLSIKNLGTTAI
QEIMSIKNSLNYIRSVDEFFEAVNKSKVNSKVAESLIKAGVFDLFDNNRKKLLIDIKNDF
YSKKNKKQKNENQEMLYSDKKPIIVTTQKDIMNYENEVFGIPLTVNYTNLLQQYEILSFY
QFNDNKQQGLSDGSVQNLLGLVCNIEMKETKNGKKIFKVYLINHSGMFEIAVFDVSDIKL
ILKKSYLQKSQEEDENSDIDISAIDFFDAHPIRIPCKVKDFNGVKNYSYSRYLGDITKWT
DIKSEFKDFKSLHIKINYNKLTEFNYLIEFMHKLKELIGSSNSINQGINNQTADSNSSSG
DKSNKAISTTRTTRNWLTLNARLYIECEDISQTSTKDYYWHFKTNTFVNINTEILSEIKS
LGHKLNSVAVEVRR
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgttcatttacacaatcattcagaatacagtttgcttgatggagcaacaaaa
cttaatgcaatggttgcaaaagcaaaaaaagacaagcaggaatatattgctttaacagac
cacggcaatatgtttggcgctgtagatttttataaaacctgtaaagcatcaggcataaag
cctatcataggttttgaatcttatgtagcagaaaaccgctttgataggaataaagatact
aaaggcggtttccatttaaccttgcttgcaaaaagcaacgagggttatcataatttgctt
aaactttctactttttcttatacagaaggtttttattataaaccaaggatagataaaaaa
cttctcaaggcttattcagaaggcattatggcaggtagtgcctgtctgcacggtgaaatc
aattattatcttttaaacaacaactatgatttagctaagaaggcttgtcttgagtatcag
gaaatttttggcaaagataacttttttatcgaaataatgagacatgacctaccagaacag
gtacagatagaaccgctactacttaaacttgcaaatgagactaatgctccgatagttgct
acaaacgattgtcattatttagaaaaagacgatgcaaaagcccaagatgtattgctttgc
atacagacaaataaattaatcggtgatccagacagaatgcgtatgaaaactcaagagttt
tattttaaaacacaggaagaaatgtatgataagtttaaagatttaaaagaggcagttgat
agtagttatttaattgcaagcaaaagcgatattgaaatacccgtaggacaattaatattt
ccaatttactcaaaagattttgatacggatgataaaaaattaaaagaccttatcgatgat
ggttttataaagcgtttcggcagaaagggcaattcacgattaacagatgaacaatatgaa
atctataaacagaggcttgaatatgaattcagcgttataagacaaatgcacttcagcggg
tactttttaattgtttgggattttataaattatgctaaaagcaaaagtattcctgttggc
cctggcagaggctctgccgcaggcagtcttgtgtcgtattgtcttggcataacagatatt
gaaccgataaagaataatttattatttgagaggtttttaaacccgaatcgtatttcaatg
cctgatattgatgtggatttttgtattgaacgacgtgatgaagttataaaatatgttttg
aaaaaatacgggtttttcaatgttgctcaagtaggcacttttgggacattgggtgcaaga
aatgttttgaaagatgtcggcagagttatgggtatgtcttttgaagaaaccaacagaata
acaaaatatatacctgattctaattcaaccataagtgaggttgaatccaataataccgag
tttaaaaaaattgccgataataatagagaactgtttaagctgtctaaaactcttgagggt
tgcaaaaggcatttttcaatacatgcggcaggtattgttatttcaagagaaccaatttac
aaactatgtcctttatataaatctgatgcgttatcagacacaggcatactggtaacacag
tatgagaaagatatattagaggacatagggcttataaaatttgattttttaggcttaaag
aacttaacagttatcgataatgcgttaaaaatgataaaagaaaacgaaggtgtatctatc
gattggcaaaatatagattttaacgacagcaatgtatataaaatgctttcaaacggtcat
gtagctggggtgtttcagcttgaaagcagtggcatgcaaggtgttttaagagaattaaaa
cctacatgctttgaagatcttgttgctgttcttgcactttacaggccaggtcctcttggc
agcggtatggttaaagattttattgagtgcaaacacggaagacagtctgttgagtatttt
ttgccacagcttgagcctattttgaaagatacttatggtgttattgtatatcaggaacag
gttatgcagatagcaaacgttctggctgggtatacaatgtcggaagctgatgttttgcgg
aaaataatgggtaaaaagcaagttgaaaaaattgggcacgaaagggaaaagtttttagca
agatgcagagaaagaaatatagaatcaaaaaaagcagaagaaatattcagcttaatggaa
aaatttgcagaatacgggtttaataaatctcattctaccgcatatgcttatattgccttt
cagactgcttatttaaaatactattaccctgaatattttatgtgtgcgttaatgaatgga
gacataggagatcccgaacagacgcaaaaatatattgaagaatgcacaaatatgggaatt
gacatcttaccgcctgatattaatttaagcagagaatattattcaataacaaaacacaat
aaccgaaaagccataagattcggatttttgtcaataaaaaatttgggcactacagctatt
caagagataatgtcaataaaaaattcattaaattatattcgaagtgtggatgaatttttt
gaagcagtaaataaatcaaaagtaaattcaaaagttgctgaaagtttaattaaagcaggg
gtatttgatttatttgataacaatagaaaaaaactattaatagatattaaaaatgatttt
tacagtaagaaaaacaaaaaacagaaaaatgaaaatcaagagatgctgtattcagataag
aaacctattattgttacaacacaaaaagacataatgaactatgagaatgaggttttcggc
attccattaactgtcaattatactaatctgctgcagcagtatgagattttatcgttttat
caatttaatgacaacaagcagcaaggtttgtctgacggcagtgtgcagaatttattgggg
cttgtatgcaacatagaaatgaaagaaacaaaaaacggtaaaaaaatatttaaagtgtat
ttgataaatcattctggtatgtttgaaatcgctgtttttgatgtatcagatattaagtta
attttaaaaaaatcttatttgcaaaagtcgcaagaagaagatgaaaatagtgatatagat
atttcagcaatagatttttttgatgcacaccctatcagaataccgtgtaaagttaaagat
tttaatggcgttaaaaattattcgtacagccggtatcttggagatattaccaagtggaca
gatattaaaagcgaatttaaagactttaaaagtttgcatataaagataaattacaataaa
ttgacagaatttaattatctgatagagtttatgcataaattaaaagaattgataggtagt
tcaaacagtattaatcaaggtattaataatcaaactgccgatagtaacagcagtagtggt
gataagagcaataaagccattagtacaactagaacaacaagaaattggcttacgttaaat
gcaagactgtatatagagtgcgaagatatcagtcaaaccagtacaaaagattattactgg
cattttaaaacgaatacttttgttaatatcaacaccgaaatattgtcggagattaaatca
ttagggcataaattaaacagtgttgccgtagaagttcgcagatag
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