Desulfurella acetivorans: DESACE_06870
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Entry
DESACE_06870 CDS
T03007
Name
(GenBank) glycoside hydrolase
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
dav
Desulfurella acetivorans
Brite
KEGG Orthology (KO) [BR:
dav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dav01002
]
DESACE_06870
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dav01011
]
DESACE_06870
Peptidases and inhibitors [BR:
dav01002
]
Cysteine peptidases
Family C40
DESACE_06870
Peptidoglycan biosynthesis and degradation proteins [BR:
dav01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
DESACE_06870
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Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM3_LYK4_5
LysM_RLK
LysM2_NFP
LysM2_CERK1_LYK3_4_5
LysM3_NFP
LysM1_NFP_LYK
LysM_OapA
Peptidase_C92
UFD1_N1
Peptidase_M4_C
HRDC
DUF1175
Motif
Other DBs
NCBI-ProteinID:
AHF97307
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Position
1301060..1302820
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AA seq
586 aa
AA seq
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MRKTILSAFLFLTLTATSRAEVYIVKKGDTLTTIAQKLGLPLEKLKYANPGIKSTDLSIG
QKILIPQIKTTTSNSQTASNVITSKVYIVQKGDNAFNISKKLGCSLDQLKNLNPNINLSN
LNVGDRIIVPNNTKIVSNTQLTNIYIVKSGDTASTIANKYNVSLSELEKLNPQLNLSNIN
IGDRIILPNNVLNGIKNTQIAAQKKTFKNENFYTVEPGDTLTAISQKTGINMNIIKSLNP
SIDWSNLQIGEEIVLRPSLQKEQTKLSNNDIYPKENQDINYIKYTVTPGDTLFSIAKTFS
TTINELKKINSLTSNNLSIGQTILVPPKIMAIKSMQNNNSSNKTPTYQAKNNTDQQQNND
QSVALDNSETNNYSLYLDHYTVQKGDTLYQIAKKFNISVDDIVALNNLPNKEITVGEILL
IPNNNNKNIATIQKNYSTSEYSLINKENPLSERLIKYAKLFVGTPYQWGGTNLETGVDCS
GFVQDVFAKFHIDLPRTSSEQFNVGKPVSLSDIKPGDLLFFQTYPGTYPSHVGIYIGDDK
FISALNQNTGVVISPLDGYFLKRFVGARRVLPSNQKFNDNTGNRSG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaactatactatccgccttcttgtttttaacattgacagcaacctctcgagca
gaggtttatatagtaaaaaaaggcgatacattaacaacaattgctcaaaaattaggctta
ccgttagaaaaattaaaatacgcaaaccctggtattaaaagcacggatctaagtattggt
caaaagatacttataccccaaataaaaaccactacttcaaattcacaaactgcgtcaaac
gttattacatcaaaagtttatattgtacaaaaaggtgacaatgcctttaatatatcaaaa
aaattaggttgcagccttgatcaattaaaaaatcttaatccaaatataaacttatctaat
ctaaacgttggcgacaggattattgtaccaaataacacaaaaatagtctcaaatactcaa
ttgaccaatatttatatagttaaaagtggtgatacggcatcaactatcgccaataaatac
aatgtttctttatcagaattagaaaaattaaatcctcaattaaatttatcaaatataaat
atcggcgatagaattattttacctaataatgttttaaatggcatcaagaatactcaaatt
gcagcccaaaagaagacttttaagaatgagaacttctatactgttgaacctggggatacc
ctcactgctatatcgcaaaaaaccggaattaatatgaatataataaaaagcttaaatccc
agtattgattggtcaaacctacaaattggtgaagaaattgttttaaggccttctttacaa
aaagaacaaacaaaactatccaataatgatatttaccctaaagaaaatcaagacataaac
tatataaaatacactgtaacaccaggtgatacgcttttttctattgccaaaactttttct
actacaattaatgaacttaaaaaaattaattctttaaccagcaataatctatctataggt
caaacaatacttgttccacccaaaataatggcaataaaatcaatgcaaaacaataactct
tcaaacaaaacaccaacataccaagcaaaaaataatacagaccagcaacaaaataatgac
caatctgttgctttagataacagtgaaaccaataattattctttgtatttagatcattat
acagttcaaaaaggtgatactctttatcaaatagcaaaaaaattcaatataagtgttgat
gacattgtagcgttaaataatcttcctaacaaagaaattactgttggagaaattttgctt
ataccaaataataataataaaaatattgccaccattcaaaaaaactactcaacaagtgaa
tattctcttattaacaaagaaaatcctttaagcgaaagattgataaagtatgctaaactc
tttgttggtacaccttatcaatggggtggtacaaatttagaaactggcgtagattgttct
ggttttgtacaagatgtctttgcaaaatttcatatagatttacctcgaacgagctccgaa
caattcaatgttggaaaacctgtatcgctatcagacatcaaaccaggcgatttattgttt
tttcaaacatatccgggaacttatccttctcatgttggtatatatattggggacgataaa
tttatatctgcattaaatcaaaatactggtgttgtaatatcacctttagatggctatttc
ctaaagagatttgtgggtgcaagaagggttttgccatctaaccaaaaatttaatgataat
actgggaatagatccgggtag
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