Desulfurella acetivorans: DESACE_07980
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Entry
DESACE_07980 CDS
T03007
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dav
Desulfurella acetivorans
Pathway
dav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DESACE_07980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dav03019
]
DESACE_07980
03009 Ribosome biogenesis [BR:
dav03009
]
DESACE_07980
Enzymes [BR:
dav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DESACE_07980
Messenger RNA biogenesis [BR:
dav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DESACE_07980
Ribosome biogenesis [BR:
dav03009
]
Prokaryotic type
rRNA helicases
DESACE_07980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Siah-Interact_N
UvrA_inter
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AHF97439
LinkDB
All DBs
Position
1503460..1505043
Genome browser
AA seq
527 aa
AA seq
DB search
MQRLEKFANLGISENILKSLLKKGYEEPTPIQEQVIPLMLKTNIDLIAQAQTGTGKTASF
GVPIIEKAQEKLDHIQCLILTPTRELAIQISQELNSLKGTKKLKILPIYGGQSIDLQVSR
LKSGIDIIVGTPGRILDHINRKTIDLSLISDMVLDEADEMLNMGFIDDVEEILKHTNDTK
RLLMFSATIPTQIVSIAKRHMKNYEIIKTKKDDTTSNLTQQIYFEVNYEDKFQALCRIID
MQKEFYALVFCKTKIETDELANKLQDAGYNALALHGDMTQKSREIVLNKFKRKSAQILIA
TDVAARGIDIENLTHVINYSIPENVESYIHRIGRTGRAGKSGIAITFVTPNEYNRLIYML
KTAKLNIKKQGLPTVEEIISFKINKIQTEIENLIQDNHEEKYTNLANKLLEQYKPTEVVA
ALLKYNFKEELDEKNYHEIKEVKPLETYSKTRLFVALGRQDSMTPKKLIDFIKQQIEINE
RDIKDIRIFDKFSFVSVPFEEAQVLLQIFKKKSNTKSLITKAREKND
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggttagaaaagtttgcaaatttgggaatttcggaaaatattttaaaatcactt
ctaaaaaaaggctatgaagaaccaacgccaatacaagagcaagtaataccattaatgcta
aaaacaaacatagacttaatagcccaagctcaaacaggtacaggcaaaacggcaagtttt
ggtgtaccaattatagaaaaagcccaagaaaaattagatcacatacaatgtttgatactt
acaccaacaagagaacttgctattcaaatatctcaagaacttaactctttaaaaggcaca
aaaaaactcaaaattttaccaatctatggtggtcaatcaatagatttgcaagtttcaaga
ctcaaaagcggcattgatataattgttggaacacctgggagaatattagatcatataaac
cgaaaaacaattgatctttcgttaatcagcgatatggttttagatgaagccgatgaaatg
ctaaatatgggttttatagacgatgtggaagaaatcttaaaacacacaaacgataccaaa
aggttgttaatgttttctgctactatacctacacaaattgtgtcaatagccaaaagacac
atgaaaaactatgaaatcataaaaacaaaaaaagacgacacaacatcaaaccttacccaa
caaatctactttgaagtaaactacgaagataaatttcaagcattgtgccgcataattgat
atgcaaaaagaattttatgcactagttttttgcaaaacaaaaattgaaacagatgaactt
gcaaataaattgcaagacgcaggttacaatgcgcttgcacttcatggtgatatgacacaa
aaatcgagggaaattgttttaaataaatttaaaagaaaaagtgcgcaaatactaattgca
acagatgtagcagcacgaggcatagacattgaaaatcttactcatgtgataaattattcc
atacctgaaaatgtcgaatcctatattcatagaatcggtaggacaggaagagctggtaaa
agcggcatagctataactttcgtcacaccaaatgagtataataggctcatttacatgtta
aaaaccgctaaacttaatataaaaaaacaaggtttacctactgttgaagaaattataagt
tttaaaataaataaaattcaaactgagatagaaaatctaattcaagataaccatgaagaa
aaatatacaaatttagcaaacaaattgctagaacaatacaaacccacagaagttgttgca
gcattgctaaagtataattttaaagaagaacttgacgaaaaaaactatcatgaaatcaaa
gaagttaaaccccttgaaacttactcaaaaacacgcctttttgtggcacttggaagacaa
gattctatgacaccaaaaaaattaatagattttataaaacaacaaattgaaatcaatgaa
agggacataaaagatataagaatatttgataaattttcgtttgtaagtgttccatttgaa
gaagctcaggttttgcttcaaatttttaaaaagaaatcaaatacaaaaagtttaattaca
aaggcaagggaaaaaaatgactaa
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