Candidatus Desulfofervidus auxilii: HS1_000045
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Entry
HS1_000045 CDS
T09963
Name
(GenBank) dimethylallyladenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
daw
Candidatus Desulfofervidus auxilii
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daw03016
]
HS1_000045
Enzymes [BR:
daw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HS1_000045
Transfer RNA biogenesis [BR:
daw03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HS1_000045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
DUF6497
Motif
Other DBs
NCBI-ProteinID:
AMM39852
UniProt:
A0A7U4QI92
LinkDB
All DBs
Position
48381..49709
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AA seq
442 aa
AA seq
DB search
MKGKFFIQTYGCQMNVHDTEYMCAILNKAGYAQAQTLKEADIILLNTCAVRQKAEEKVYS
FLGRLKAFKKRHPGLIIGVGGCVAQKEGERILKRIPYIDLVFGTHQFFRVAELIEEVKKN
GHRICCIDYTYQLEPPCHVFPLSHKMYGRAYLTIMQGCDNFCSYCIVPYVRGRQISRRSE
NIINEAKRLLDMGIKEIILLGQNVNSYGQDRLEEISFSELLFKINKLPGLKRLRFITSHP
KDISPDVIKAFADLDTLCEHIHLPVQSGSDRILKRMGRKYTRSEYLQKIEALRKACPEIS
ITTDLIVGFPGETKKDFKDTISLLQEVEFDAIFAFRYSDRPPAKAVSFPEKVNEQEKAER
LSEVLEIQAPITERKNRVKKGRLLEVLLDSYSKRGQQLCGRTRCNRVVNVEGDESLMGHL
VEVIIEEVLPHSLKGKVVKILD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtaaattttttattcaaacttatggttgtcaaatgaatgttcatgatacagag
tatatgtgtgccattttgaataaagcaggttatgctcaagcacaaacgttaaaggaggca
gatattattttgctcaatacctgtgctgtgcggcaaaaggcagaagaaaaggtttatagt
tttttagggcgtttaaaagcctttaaaaaaaggcaccctggtttgattattggagtaggt
gggtgtgtggctcaaaaagaaggggaaaggatccttaaaaggataccttatatagattta
gtatttggaacccatcaattttttagagtggctgagcttattgaggaagtcaagaaaaat
ggacatagaatctgttgtatagattacacctatcagttagaacccccttgccatgttttt
cctttatctcataagatgtatggtagagcctaccttactattatgcaaggctgtgataat
ttttgtagctattgtattgtgccctatgtgcgtggaagacaaatcagtcgaaggagtgaa
aatattattaatgaagcaaaaagactgttagatatgggaataaaagaaatcattctatta
ggccaaaatgtcaattcttatgggcaagataggttagaggagataagtttttctgaatta
ttatttaagataaataagttgcctggattgaaaagactgaggtttattacttcacatcct
aaagatatctcaccagatgtaattaaagcctttgcggacctggataccctatgtgagcat
attcacttgcctgtgcaatctggttcagatcgcattttaaaaagaatgggacgaaaatat
accagaagtgaatacttacagaaaatagaagccctgcgtaaggcctgtcctgaaatttct
attactaccgatttaatcgttggttttcccggagagacaaagaaagattttaaagatact
atttctctcttgcaggaagtggagtttgatgctatttttgcttttaggtattcagataga
ccaccggcaaaggctgttagttttcctgaaaaggtaaatgaacaagaaaaggcagaaagg
ttaagtgaagttttggaaatacaggcaccgattacagaaagaaaaaatagggttaaaaaa
gggaggttgttagaagtgttattagatagctatagtaaacgaggtcagcaactctgtggc
aggactagatgtaatcgggtggttaatgtggaaggagatgagagtttaatgggacatttg
gtggaggtaattatagaggaagtattaccccattctttaaaaggaaaggtggtaaaaata
ttggattaa
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