Candidatus Desulfofervidus auxilii: HS1_000148
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Entry
HS1_000148 CDS
T09963
Name
(GenBank) Histone-like bacterial DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
daw
Candidatus Desulfofervidus auxilii
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daw03032
]
HS1_000148
03036 Chromosome and associated proteins [BR:
daw03036
]
HS1_000148
03400 DNA repair and recombination proteins [BR:
daw03400
]
HS1_000148
DNA replication proteins [BR:
daw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HS1_000148
Chromosome and associated proteins [BR:
daw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HS1_000148
DNA repair and recombination proteins [BR:
daw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HS1_000148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AMM39954
UniProt:
A0A7C1ZT38
LinkDB
All DBs
Position
complement(152243..152515)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKGELVDAVAKDAGISKAVAGKVLNSIIDTVTKALKKGDKVSLVGFGTFSIVKRKARKG
RNPQTGKEIKIPAKKVVKFKVGANLAKTVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggagaattagtagatgctgttgctaaagatgctggtatttctaaggccgta
gctgggaaggtgttgaacagtattattgatacagtaacaaaggctctaaaaaagggagat
aaggttagtctagttggatttgggacattttctattgtgaagagaaaggctagaaaggga
aggaatccccagacaggtaaagaaattaaaattcctgctaaaaaagtggttaagttcaaa
gtaggggctaatttagccaaaaccgttaagtaa
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