| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
daw Candidatus Desulfofervidus auxilii
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:daw00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HS1_000488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:daw03021]
HS1_000488
03400 DNA repair and recombination proteins [BR:daw03400]
HS1_000488
Enzymes [BR:daw01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HS1_000488
Transcription machinery [BR:daw03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HS1_000488
DNA repair and recombination proteins [BR:daw03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HS1_000488
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(469477..473601)
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| AA seq |
1374 aa
MGGRVSSLKEVRRRFGRIKKFLEIPYLLELQKKSYEQFLQKDVPPDQRQDIGLQGVFKEV
FPFTDYAGTAALEFVKYEIGNPRYEEKECLEQGLTYEAPVRLTVRLAVYDVDKASNQKTI
RDIKEQEIYFGTIPLMTERGTFIINGVERVIVNQLHRSPGIFFEIDKALRHVRGKLLYTA
RIIPLRGSWLDFEFDNKGRLYVRIDRRRKFPVTLFLKALGYTSEQILNYFYPTQKVRYKD
GFFYIELIPDFLLGSRLTEDLLNPETGEVLISAHTYITRIHLKQLEKLGIKEIPITEQEL
KTKIIAKDIKHPKTGEVIAHHNQEISDEIIEKIKREKIEEVEVLFINEYKYDTSLRDTLL
EDKTPDQEKALFEIYRHMRPTSPPTLEVAKDFFHKLFFDPEYYDLSKVGRFKLNLRLGLD
IPINKYTLQNEDILEAVKKLLELKTTQGPPDDIDHLGNRRVRAVGEVLENQYRIGLVRME
RAIKERMALQEIETLMPYDLVNSKPVNTVVRDFFGTSQLSQFMDQTNPLSEVTHKRRLSA
LGPGGLSRERAGFEVRDVHPSHYGRICPIETPEGANIGLIVSLATYARVNEFGFIETPYR
VVENRKVTDKIKYLTALEEGDCPIAQANALLDKEGRLVNDIVSARVRGEFVMVRAEEVKY
MDVSPNQLVSVSSSLIPFLEHDDANRALMGSNMQRQAVPLLVTEAPLVGTGMEGVVARDC
GHCILAEADGLVEEVDASYLVVRYLDKDGQKPLHELVKVYELNKFKRSNQNTCFNQKPLV
KVGERVHKGQVLADGAATDRGELALGKNILVAFMSWGGYNFEDAIIISERLVRDDVYTSL
HIVEFELAARETKLGPEEITRDIPNASEEALKNLDESGVIRIGAEVKPGDILVGKITPKG
ETLYSSEEKLLRAIFGEKASDVKDSSLRVPPGVEGIVIDAQVFSRKNQKEKDFRRKWIEE
QEIKKLIRYRDAEIKVFKKTVEEELLKLLIGQKVVQDLKDLSGNILIAKGDKITSEILNI
PLRRLKELRLSDETIEQKMNNLIDVFFEEVDRIRNRYEEKMDKLRQGNELPPGVIKAVKV
YVAMKRKLSEGDKMAGRHGNKGVVSKIVPLEDMPYLADGTPVDIILNPLGVPSRMNIGQI
LETHLGWASKELGQKIRKMVDDMQKPELIRQWLKELYSPEQYEQCFASLSDKELIEVVKK
LDKGIPVASPVFDGAPEAEIKKWLKKSGLSESGKTIVYDGRTGEPFEQPVTVGIMYMMKL
HHLVDDKIHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTIKS
DDVAGRTRMYEKIVKGNNTLEVGLPESFNVLVKELQALGLNVELLTSNKGAKVK |
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| NT seq |
4125 nt +upstreamnt +downstreamnt
atgggtggtagagtgtctagtttaaaagaagtaagacggcgttttggccgtattaaaaag
tttttggagataccctatcttcttgaactccaaaaaaaatcctatgagcagtttcttcaa
aaagatgtgccaccggatcaacgtcaagatataggtttgcaaggggtttttaaagaagtt
tttccttttactgattatgcaggcactgctgccctggaatttgtaaaatacgagattgga
aatcctcgttatgaagaaaaagaatgtttagaacaaggcctgacttatgaagctcccgtg
cgtttgacagtgagacttgccgtttatgacgtggataaagcgtctaatcaaaaaactata
agggatattaaggaacaagaaatttattttggcactattcctttgatgaccgaaagggga
acatttatcattaatggagtagaaagggtaattgttaaccaacttcatcgttcaccaggt
attttctttgaaatagacaaggcattacgacatgtaaggggtaaattgctttacaccgcg
cgcattattccattacggggttcgtggctagattttgagtttgacaataaaggccgcctt
tatgttagaatcgatagacgacgcaaattcccagtgacactttttctgaaagctttaggt
tatactagtgaacagattctaaattacttttatcccacacaaaaagttagatataaagat
ggttttttctatattgaacttataccagattttttattgggttccagattgaccgaagat
ttactcaatccggaaaccggagaggtgctaatttccgctcatacttatattactaggatt
cacctgaaacaattagaaaaattggggataaaggaaattcccatcacagagcaagaatta
aaaacaaaaattattgctaaagatattaaacatcccaagacaggagaagtaattgctcat
cacaatcaagaaataagtgatgagattattgagaagattaagagggagaagattgaagaa
gttgaagttttgtttattaatgagtataaatatgatacttctttacgagatacactttta
gaggacaagactcctgaccaagaaaaggccctttttgagatatatcgccatatgcgtcct
actagtccacctactttagaagtggctaaagatttttttcataaattgttttttgaccct
gaatattacgatctttctaaagtgggtcgttttaaattaaacttgcggttgggtttagat
attcctattaataaatatactttgcaaaatgaagacattttagaggcagtgaaaaaactt
ctagaactgaaaacaactcaaggtcctcctgatgacattgaccacttgggtaatcgaaga
gtgcgggcagtaggtgaagtgttagaaaaccaatatagaattggcttggtccgcatggag
agagctattaaggaaagaatggccttacaggagatagagacacttatgccctatgactta
gtgaactcaaaacctgtaaatacagtagtaagagatttctttggaaccagccaactttct
caatttatggaccagacaaacccgctttcagaagttacacataaacgccgtttaagcgcc
ttaggaccagggggactgagtagggaaagagctggttttgaagtaagggatgtgcatcca
tctcattatggacggatttgtcctattgaaacccccgagggtgccaacattggtcttatt
gtttctttagctacctatgccagagtaaatgaatttggatttattgagaccccttataga
gttgtagagaatagaaaggtaactgataagattaagtatcttactgctttagaagaagga
gattgtcctattgctcaagctaacgcgctattagataaagaggggagattagtaaatgat
attgtttctgctcgtgttcgaggtgagtttgttatggtgagagcagaagaagtgaaatac
atggatgtatcacccaaccagttagtgagtgtctcttcctcactcattccctttttagaa
cacgatgacgctaatcgtgccttgatgggttcaaacatgcaaaggcaggctgtcccctta
ttagtaactgaagcacccctagtagggacagggatggaaggagtggtagcacgcgattgt
ggccattgtattttagctgaggccgatggattggtggaggaagtagatgcttcctatcta
gtggtaagatatttggataaggatggacagaaaccattgcatgagttggtaaaggtgtat
gagctaaataaatttaaacgcagtaatcagaatacctgtttcaatcagaaaccattagta
aaagtgggagaaagggttcataaaggtcaggttttagctgatggagcagctacggataga
ggagaattagctttaggaaaaaatattttagtcgcttttatgtcttggggagggtataat
tttgaagatgctataattatcagtgagagattggtaagagacgatgtttatacctccctc
catatagtggagtttgagttagcagcaagggagaccaaattggggcccgaagagatcact
cgtgatattcccaatgctagtgaggaggcattaaaaaatctggatgaaagtggagttatt
cgtattggtgctgaagtaaagccaggagatattttagtaggtaaaattaccccaaaaggt
gaaacgttatattcatctgaagaaaaactccttagggctatctttggagaaaaggctagt
gatgtcaaagattcttctctaagagtacccccaggtgtggagggtattgtcatcgatgct
caggtattttctcgcaaaaatcagaaggaaaaggattttaggagaaagtggattgaagaa
caggagataaaaaagctgataagatatagggatgctgagattaaggttttcaaaaagact
gtagaagaagaattacttaaattattgataggacaaaaggttgtccaagatttgaaagac
ttaagtgggaatatcttaatagccaaaggggataaaattacttctgaaattttaaatatc
cctttacgtcgtttaaaggaactccggttgagtgatgaaactatagagcagaaaatgaat
aatttgatagatgtgttttttgaagaagtagataggattagaaatagatatgaagagaag
atggataaattaagacaaggtaatgagttgccaccaggtgtaataaaagcagttaaggtg
tatgtagctatgaaacggaagttgagcgaaggtgacaagatggctggcagacatgggaat
aaaggtgtggtgtccaaaattgttccccttgaagatatgccttatttagccgatggcacc
ccagtagatataatacttaatcctttaggtgtgccttcgcgtatgaatatagggcagatt
ttagaaacacatttaggttgggcttcaaaagagttggggcaaaaaataagaaaaatggta
gatgatatgcagaaaccagaattaataaggcaatggcttaaagaactctattcacctgaa
caatatgaacaatgtttcgcttctttgagcgataaagaattaatagaagtagtaaaaaaa
ttggataaaggtattcctgtggcctctcctgtatttgatggtgcacctgaggcggaaatt
aaaaaatggttaaaaaaatcaggattgtcagagagtggaaagaccatagtttatgatgga
aggacaggtgagccctttgagcaaccagtaaccgtgggtataatgtatatgatgaagctc
caccacttggtagacgataaaattcatgctcgttctattggaccttattccctaattact
caacagcctttaggcggtaaagcccaatttggtgggcagaggtttggtgagatggaggta
tgggcattggaagcatatggagctgcatatactttgcaagaaatgcttactataaaatcc
gatgacgtggcaggtcgaactcgaatgtatgaaaaaattgtaaagggtaataatacttta
gaagtaggcttaccagaatcctttaatgttctggtgaaggaattacaagccctaggatta
aatgtagaattattaacttctaacaagggggcaaaggtaaaatga |
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