KEGG   Candidatus Desulfofervidus auxilii: HS1_000837
Entry
HS1_000837        CDS       T09963                                 
Name
(GenBank) RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
daw  Candidatus Desulfofervidus auxilii
Pathway
daw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:daw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HS1_000837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:daw03021]
    HS1_000837
   03400 DNA repair and recombination proteins [BR:daw03400]
    HS1_000837
Enzymes [BR:daw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HS1_000837
Transcription machinery [BR:daw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HS1_000837
DNA repair and recombination proteins [BR:daw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HS1_000837
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AMM40641
UniProt: A0A7C1VZJ3
LinkDB
Position
complement(830271..830474)
AA seq 67 aa
MARVTIEDCLKKVNNRFAIVHMAVKRVLQLREGARPLVECDNKEIVVALREIAAGKVKPK
TEENGQK
NT seq 204 nt   +upstreamnt  +downstreamnt
atggctagagttacaatagaagattgtttaaaaaaggtaaataatcgttttgccatagtc
catatggcagtgaaaagagtgttgcaacttagagaaggggcaagacctttagttgaatgt
gataataaagaaattgtagtagcattaagggaaattgccgcaggcaaggtaaaaccaaag
accgaggaaaatggccaaaaataa

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