Candidatus Desulfofervidus auxilii: HS1_000962
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Entry
HS1_000962 CDS
T09963
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
daw
Candidatus Desulfofervidus auxilii
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daw03400
]
HS1_000962
DNA repair and recombination proteins [BR:
daw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HS1_000962
Archaeal homologous recombinant proteins
HS1_000962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
ABC_tran
TMF_TATA_bd
ABC_tran_CTD
NPV_P10
AAA_27
FAM209
zf-C4pol
AAA_21
DUF3450
AAA_29
GAS
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMM40766
UniProt:
A0A7U4QK00
LinkDB
All DBs
Position
942505..944616
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AA seq
703 aa
AA seq
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MLIQEIHVDGIGPYTNPQTLTLEGNLVGIYGRNGAGKTFLLEATFATLYGNFPSRKGTIY
DQINDNLTKGELSIKFSLNGELYQAKRVIDKKSKKQLCTLSKNGSPIAGPKTAEYLNAIR
TLLGTEETVLASTFSTDDFTGDLTLLPGSKRKELLAEWLELEHYQTLSDAAKEKARGLES
SLAEARARLEILLERAEGTESLREHIRALKGEINTIRKEIESWESEKDKIERKLAALNEK
RKTLEQLKQRRETINEELLMLRERYRKLCDDRRKILSIMKEKPYLLKKMAEHKEISELVD
QLEQKVNAMLEKREKAQKEKDSLTKKLHEVEKEIARISSKLAAAKRESETIDRVRCNRRD
CPFLQSAWAAREVLPSLTKRLKAKEELAEKIREKIASVSVCEIPRGVAIQLASLKKRKQE
LNEEVLRLTRLEEAEKRLAYFEAEIRATVESGKRKKDELKRTLQQIEEIELELKDHEGGE
EVLSVVRLKLDSLRSSLQDKNMSLGDLTRRLEEAEKAREEAEKLREKVERLREDFEDYSF
ICEMFGKCGIQPLLMEASLPRLEQLTQQFLSSICERQFNVTFKTTKETKSGKIQETLDIV
VTDLETGTKRDIANFSGGEKTLIRQAIRMASAVFRSEVHKNRWDTFFCDESFGKLDEVNA
RQLLSAMKALTNYFKKVVYISHERELIEIASQKVLVENGKIAR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcaagaaatccacgttgatggaatcggcccatacacaaaccctcagaccctc
accctggaaggaaatctggttggtatttatggaagaaacggagccggaaagacattcctg
cttgaagccacatttgccaccctttatggaaactttccttccagaaagggaacaatctat
gaccagataaatgataaccttacaaaaggagaactttccataaaattctccttaaacgga
gaactctaccaggcaaaaagagttatagataaaaaaagcaaaaaacagctatgcactctg
tccaaaaacggctcacccattgccgggccaaaaaccgccgaatacctaaatgccataaga
acccttcttggaacagaagaaaccgtccttgcctcaacctttagcacagatgactttaca
ggtgatcttacacttctgccaggcagtaagagaaaagaacttctggcagaatggctggaa
cttgaacactatcaaacactctcggatgcagcaaaagaaaaggcaagggggctggaaagc
agccttgcagaagcaagggcaaggcttgagatccttttagaaagggcagagggaacagaa
agtctcagggaacacataagggccctgaagggggagataaacaccataaggaaggagatt
gaaagctgggaaagtgagaaggataaaattgaaagaaaacttgctgcactcaatgaaaaa
agaaaaacgcttgagcaactaaaacaaagaagagagaccattaatgaagaactgctgatg
cttagagaaaggtacaggaagctgtgtgacgatagaaggaagatcctgtccattatgaag
gaaaagccatatctcctaaagaagatggcagagcataaggagatttcagaattagttgat
cagcttgagcaaaaggtaaacgcaatgcttgaaaagagggaaaaggcacagaaggaaaag
gacagcctgacaaaaaaacttcatgaggttgaaaaggaaattgccaggatttccagcaaa
cttgccgcagcaaagagggaatcagagaccatagaccgggtaaggtgcaacaggcgggac
tgtccgtttcttcagagcgcctgggccgcaagggaggtccttccatcactcacaaagaga
ctaaaggccaaagaagaacttgcagaaaagataagagagaagatagcctcagtttctgtt
tgcgagatccccagaggggttgccatccagcttgccagtctcaagaagagaaaacaggaa
cttaatgaagaggtcctcagacttacccgccttgaggaggcagagaagagacttgcctat
tttgaggctgagatcagggccacggtagagagtgggaagagaaagaaagatgagcttaag
aggactttgcagcagatagaggagatagaacttgagctaaaggaccatgagggaggggaa
gaggtgctgtctgtggtaaggctaaagcttgatagcctcaggtcctcccttcaggataaa
aacatgtcccttggagacctgacccgccgccttgaggaggcagagaaggccagggaagag
gcagaaaagctcagggaaaaggttgagaggcttagggaagactttgaagattacagtttt
atctgcgagatgtttgggaagtgtggaattcagccactcttgatggaagccagtctgccc
cgacttgaacaacttacccagcagtttctgtcctcaatctgcgaaaggcagttcaatgtg
acctttaagaccacaaaggaaacaaaatcaggaaaaatacaggaaactctggatatagtg
gtaacagaccttgaaacaggcacaaaaagggatattgcaaacttctcaggtggtgaaaag
acacttataagacaggccatcagaatggcatcagctgtattcagaagtgaagtgcataaa
aaccgctgggacaccttcttctgcgatgagtcattcggaaaactggatgaggtaaacgca
agacagctcctttcagccatgaaagcccttacaaattacttcaaaaaggttgtgtatata
agtcatgaaagagaacttatagaaattgcatcacagaaagtgcttgttgagaacggaaaa
attgcaaggtaa
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