Candidatus Desulfofervidus auxilii: HS1_001487
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Entry
HS1_001487 CDS
T09963
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
daw
Candidatus Desulfofervidus auxilii
Pathway
daw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HS1_001487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daw03400
]
HS1_001487
Enzymes [BR:
daw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HS1_001487
DNA repair and recombination proteins [BR:
daw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HS1_001487
RecFOR pathway proteins
HS1_001487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
nSTAND3
NB-ARC
AAA_16
AAA_14
DUF815
AAA_3
AAA_18
Mg_chelatase
Rad17
AAA_2
AAA_33
TsaE
NPHP3_N
Viral_helicase1
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AMM41286
UniProt:
A0A7C1W0B7
LinkDB
All DBs
Position
complement(1478709..1479728)
Genome browser
AA seq
339 aa
AA seq
DB search
MNDFRLVEPLARDKEAKEEIGLRPRSLDEFLGQEEIKEKLKVFIEAAKNRGEELDHVLLH
GLPGLGKTTLAYLISKELGVNLRATAGPVLEKPGDLAAILTNLNPKDVLFIDEIHRLHPV
IEEILYPAMEDFKLDLVIGQGPNARTIKIDLSPFTLVGATTRTGLLTSPLRDRFGVFIYL
DFYTPEDLQKIILQAAKRLNVKIEPQGAAEIANRSRGTPRIALRFLKRVRDFAQIKADGV
ITQRVADEALEFMDIDKCGLDCLDRKILRTIIEKFNGGPVGIDALAAAIGEEKDTISEVY
EPYLVQKGYLQRTPRGRIATSTAYQHLHIKITKGQQGLF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactttcgtttagtagaacctttagccagagataaagaagctaaagaggaaata
gggcttcgcccccgttctctagacgagtttttaggtcaagaggaaattaaagaaaaacta
aaagtatttattgaggcagccaaaaacaggggggaagaattagatcatgtccttttacat
ggtttaccaggcttaggtaaaaccactctcgcttatttgatttctaaagaactaggtgtt
aatttacgagccacggccggaccagttttggaaaaaccaggggacctggcagcaattttg
actaatttaaaccctaaagatgtgctttttattgatgaaatccaccgtttacatcctgta
atagaagaaattttatatcctgcaatggaagatttcaagctagatctggttattggtcag
ggacctaatgctcgcactattaaaatagatttatcaccttttactttagtgggagctact
acccgaacaggtttattgacttcaccattaagagatagatttggagtttttatttacctt
gatttttatactccagaagatttgcaaaagatcatccttcaggctgctaagcgtttaaat
gtaaaaattgaaccccaaggtgctgctgaaattgccaaccgttcgcgaggcactcctaga
atcgccttgcggtttttaaaaagagtgcgggattttgctcaaatcaaagcagatggggtt
atcacccaacgggttgctgatgaggccctagaatttatggatatagataaatgtgggctg
gattgtctggatagaaaaattctccggactattattgagaagtttaatggaggaccagta
ggaatcgacgccttagcagcagcgattggagaagagaaagatactatttctgaagtttat
gaaccttatctagtgcaaaaaggctatttacaacgcactccccgggggcgtattgccacc
tctactgcttaccaacaccttcatataaagataactaagggacagcagggtctattttaa
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