Candidatus Desulfofervidus auxilii: HS1_001773
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Entry
HS1_001773 CDS
T09963
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
daw
Candidatus Desulfofervidus auxilii
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
daw01011
]
HS1_001773
Enzymes [BR:
daw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HS1_001773
Peptidoglycan biosynthesis and degradation proteins [BR:
daw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HS1_001773
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AMM41567
UniProt:
A0A7U4QLI6
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All DBs
Position
complement(1773052..1774578)
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AA seq
508 aa
AA seq
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MKRILNFFISCVLLAGCVPSKPPSLPQTPVCEKKSALNISEKATSPIPKKEGKKPLVAEK
TPIKKTPLITKKISPKKKVATIPIVINDRVQTFINYYTKNPNGRRWFHQVLTRAQEYKPL
MEKILLKAGLPKEVFYLAFVESGFDNHAYSYAHACGPWQFIASTATHYGLKIDYWVDERK
DPELATKAAARYLKDLYSQFKDWYLTAAAYNAGNGTIQKLIKRYKVSDYWTLIKKAKELK
LETKQYVPKWIATITIAKNPKAYGFEIKPKDPWDCDKVHTYGLTDLTLLSKETMIPLKKL
KRLNPALRRPFTPPYPYFLHIPKEKKEIVLASLGAQAETTQVFKHFRYYKVKPGDTLWEI
ARKNRKSVDFIARLNGISPPYILRPRQKLLIPYGEPQTSIYTQRDKTGHYKIIYTVKSGD
TLWDIARLFGTSVRKLKKSNKIKGCIYPGDQLLIPLPQKIIIYEVKKGDTLWDIARKFKT
TIREIISLNKLSSSLIRPGDKLKIKIEG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaggattcttaatttttttatatcttgtgttttattagctggatgtgttccttct
aaaccaccttctttaccacaaacccctgtttgtgaaaaaaaatccgctttaaatatttct
gaaaaggctacttcgcctattcccaaaaaggaaggcaaaaaacccttagttgcggaaaaa
acgcctattaaaaaaacaccactaataaccaaaaaaatttctccaaagaaaaaggttgcc
accatacctattgttatcaatgatagagttcagacctttatcaattattatactaaaaat
cctaatggtcggaggtggtttcaccaggtattaactcgtgcccaagagtataaacccctt
atggaaaaaatcttattaaaggcaggactacctaaggaggtattttatttagcgtttgtg
gaaagtggctttgataatcatgcttattcttatgctcatgcctgtggaccatggcaattt
attgccagcacagctactcactacggtcttaagatagattactgggtagatgaaagaaaa
gacccagaattggctactaaggcagctgcccgttatttaaaagacctctatagtcagttt
aaagattggtatcttaccgcggctgcttataatgcaggaaatgggactattcaaaaattg
ataaagagatacaaagtaagtgattattggactcttatcaaaaaggccaaagagttaaaa
ttagaaaccaagcaatatgttcctaaatggatagctaccattaccattgctaaaaatcca
aaggcatatggctttgagattaaacccaaagacccctgggattgcgataaggtgcatact
tatggccttacagaccttaccctcttaagtaaagagactatgattccattaaaaaaacta
aaaagacttaaccctgccttaaggcgtccctttaccccaccttatccttattttttacac
atacccaaagagaaaaaagaaattgtcttggcctctctaggggcacaagcagaaacaact
caggtttttaaacattttcgatattataaagtaaaacctggggatacactttgggagata
gccagaaaaaatcgaaaaagtgttgatttcattgctagacttaatggtatatctcctcct
tatatccttcgacctaggcaaaagctccttattccctatggtgaaccccaaactagtatt
tatactcaaagagataaaacaggccattacaagataatttataccgtgaagtcaggagat
accctctgggatattgcccgccttttcgggacttcggtaaggaaattaaagaaatcaaac
aagattaaaggctgtatttatcctggagatcaactccttattcctcttccccaaaaaatc
attatttatgaagtaaaaaaaggagatacgctttgggatattgctagaaaatttaaaacc
accattagagagattatttctttaaacaaactttcttcatctttaatccggccaggcgac
aaattgaaaataaaaattgagggctaa
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