Candidatus Desulfofervidus auxilii: HS1_001840
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Entry
HS1_001840 CDS
T09963
Name
(GenBank) phage SPO1 DNA polymerase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
daw
Candidatus Desulfofervidus auxilii
Pathway
daw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HS1_001840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daw03400
]
HS1_001840
Enzymes [BR:
daw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HS1_001840
DNA repair and recombination proteins [BR:
daw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HS1_001840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PF0610-like_N
UPA-FIIND
Motif
Other DBs
NCBI-ProteinID:
AMM41634
UniProt:
A0A7U4TI47
LinkDB
All DBs
Position
complement(1848439..1849110)
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AA seq
223 aa
AA seq
DB search
MKEVLEELKIYLSWLKEMGINSVYLLPEQRKMLEKLSSKQQLLQEIKIELGDCKRCELWK
TRHKIVFGEGPAEAKVVLVGEAPGHEEDLQGKPFVGAAGELLTKMLKAIGLSREEIYITN
VVKCRPPHNRNPKLQEIEQCKSFLIRQLNIIKPSVICTLGSIATHTLLQKDIPISHLRGR
VHLWQGIKLIPTFHPAYLLRNPGSKKLAWEDLKLLKKVLEKSI
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggtattagaggagttaaaaatatatctttcttggttaaaagaaatgggtatt
aattcagtttatcttttacctgagcaaagaaaaatgttggagaaattaagttcaaaacaa
caattattgcaagaaataaaaatagaattaggtgattgtaaaagatgtgaattatggaaa
acccgccataagattgtctttggtgaaggcccagctgaggccaaagtagtattagtgggt
gaggccccgggacatgaagaagacttacagggaaaaccctttgtaggtgcagctggagaa
cttttaactaaaatgttaaaagccataggactctccagagaagagatttatattactaat
gtggtcaagtgccgtccacctcataatcgcaatcccaaattgcaagaaatagaacaatgt
aagtcttttttgataagacaattaaatattataaaaccatctgttatctgcaccttaggc
agtattgctactcacactcttttacaaaaagatattcctatttcgcatcttagaggcaga
gtgcatttatggcagggaattaagctcattcctacttttcaccctgcttaccttttacgc
aatcctggaagtaaaaaattggcttgggaggacttaaaattattaaaaaaagtgctagaa
aagtctatttag
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