Candidatus Desulfofervidus auxilii: HS1_001978
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Entry
HS1_001978 CDS
T09963
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
daw
Candidatus Desulfofervidus auxilii
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daw03021
]
HS1_001978
03009 Ribosome biogenesis [BR:
daw03009
]
HS1_001978
Transcription machinery [BR:
daw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HS1_001978
Ribosome biogenesis [BR:
daw03009
]
Prokaryotic type
rRNA transcription factors
HS1_001978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
HHH_5
KH_1
HhH-GPD
KH_2
SAM_2
DUF4332
Motif
Other DBs
NCBI-ProteinID:
AMM41770
UniProt:
A0A7U4TIV3
LinkDB
All DBs
Position
2000606..2001883
Genome browser
AA seq
425 aa
AA seq
DB search
MELKRIIEQLTKDKGIEKEFLIKTIEEAVYSAARKKYGLQADIEVVYNEETGEIEVYLFK
TVVETLTNPIKEIILSEAQKLNQEVELGDSVGIKLSMAEFGRIAAQAAKQVILQRMKEAE
EEIIYEEFKDRKGEVVNGIVQRLDKEGVIVNLGKTEALLPWGEVIPNKDNFKRGDRLRAY
ILDVRKESKISQIILSRTHPAFLIALFTLEVPEISEGIVKIINAAREPGSRAKIAVTSQD
PDVDPIGACVGIRGSRVQNVVRELKGEKIDIVHWDPDPAKFICNAIAPAKVLKVIMDKDE
QRMEIIVPDDQLSLAIGRQGQNVRLASKLTGWKLDVRSKSRYKEIQRLQYESLLKVDGMT
KEIADLLTQNEIVSAEELAQATVEELKGLGFREDKALALITAAEKFMSTPQATEDVKLEA
ESGEE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaaagaattattgaacaattaaccaaagataaaggcattgaaaaggagttt
ttaataaaaaccattgaagaagcagtctattcagcagcaagaaaaaagtatggtcttcaa
gctgacattgaggttgtgtataatgaagaaacaggagagatagaagtttatctttttaaa
acagtggtagaaacacttaccaatccaataaaagaaataattttgagtgaggcccaaaag
ctaaaccaggaggtagaactaggagatagcgtggggataaaactgagtatggctgaattt
ggaaggatagctgctcaagcggccaaacaggtaattctccaaagaatgaaggaagcagaa
gaagaaattatatatgaagagttcaaagataggaaaggagaggtagtaaatggaattgtc
caacgattagataaagaaggagttatagttaatctgggaaagacagaagcacttttaccc
tggggagaagttattcctaataaagacaattttaaaagaggagatagattaagagcctat
atcttggatgtaagaaaggagagtaaaatatcacaaattatactttctaggacacaccct
gcctttctcattgccttgtttactttagaagtgcctgaaattagtgaaggtatagttaaa
attattaatgcagcccgtgagcctggtagccgtgcaaaaattgccgtgacttcgcaagat
ccggatgtagaccctattggggcttgtgtgggcatcaggggctcaagggttcaaaatgtg
gtaagggagttaaagggagaaaaaatagatattgtccattgggatcctgacccagcaaaa
tttatatgcaatgccatcgccccagcaaaggtattaaaagtaattatggataaagatgaa
caacgtatggaaatcattgtccctgacgaccaactttctcttgctattggtagacagggg
caaaatgtgcgtttagcttccaaattaacaggatggaaacttgatgtccggagtaaaagc
agatataaagaaatacaaagattacaatatgaaagtttattgaaagtagatggaatgacc
aaagaaattgctgatttattgacccaaaatgaaattgtttctgctgaggaattagcccaa
gctaccgtagaagagttaaaagggctgggatttagagaagataaagccttggcattaatt
actgctgccgaaaaatttatgtctacgcctcaagcgacagaagatgtgaaattagaagcc
gaaagtggagaagaataa
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