Candidatus Desulfofervidus auxilii: HS1_001981
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Entry
HS1_001981 CDS
T09963
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
daw
Candidatus Desulfofervidus auxilii
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daw03016
]
HS1_001981
Enzymes [BR:
daw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HS1_001981
Transfer RNA biogenesis [BR:
daw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HS1_001981
Prokaryotic type
HS1_001981
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF2794
BLYB
Motif
Other DBs
NCBI-ProteinID:
AMM41773
UniProt:
A0A7U4QLX5
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All DBs
Position
2004750..2005694
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AA seq
314 aa
AA seq
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MKNYLPASKELKPKIRMKEISGIFVIDKPGGITSFEIVRRIKTWLNLKKVGHGGTLDPLA
TGVLPVFINKATKIAQFFLNMDKTYMATMRLGLETETMDIEGEITRVCKKIDVSIEELQM
VMRGFQGKITQIPPSYSSLKVGGVPLYKWARKGIKIQPAPREVEIYELKLKSFRPPEVDF
EVSCSKGTYIRTLCSDIGKKLGCGACLVSLRRLKTGPFTIEMAIPLEVLKEAVKAGKWQD
YLLDLNKALANFEAVVLNKKQEEQVKHGRFIRWPYKLTRPLIRALNKENQLVALLQTQET
QKGMQLRPVKVFDI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattatctccctgcctctaaagagttgaaaccaaagattaggatgaaagaaata
tcaggcatatttgttattgacaaaccagggggtattacttcctttgaaatagtgaggcgg
attaaaacctggcttaatctgaaaaaagtaggccacggtggcactttagacccattagct
actggagttttacccgtttttatcaataaagccaccaaaattgctcagttttttctaaac
atggataagacttatatggctactatgcgtcttggtttagagacagaaaccatggatatt
gaaggagaaataacacgtgtttgcaaaaaaatagatgtttccatagaagaattgcaaatg
gtaatgcgaggttttcagggaaagattactcagattcccccttcttattccagtctcaag
gtaggtggagttcctctttataaatgggcaaggaagggtattaagatacaacctgctccg
agggaagtagaaatttatgagttaaagcttaagagctttagacccccggaagtggatttt
gaagtctcatgctctaaaggcacatacattagaacattatgttcagatatagggaaaaaa
ctgggttgcggtgcttgtttggtcagtttaagaagattgaagacaggtccttttactatt
gaaatggctattcctcttgaggttttaaaggaggctgtaaaagcaggaaaatggcaggat
tatctcttggacttaaataaagctctagctaattttgaagcggtagtgcttaataaaaag
caagaggaacaggttaaacatggaagatttattcgctggccttataaactgacaaggcca
ttaattcgtgccttaaacaaagaaaatcaattggttgccttattgcaaacccaagagact
caaaaaggtatgcaattacgaccagtaaaggtttttgatatttaa
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