Candidatus Desulfofervidus auxilii: HS1_002040
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Entry
HS1_002040 CDS
T09963
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
daw
Candidatus Desulfofervidus auxilii
Pathway
daw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HS1_002040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daw03019
]
HS1_002040
03110 Chaperones and folding catalysts [BR:
daw03110
]
HS1_002040
03029 Mitochondrial biogenesis [BR:
daw03029
]
HS1_002040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
daw04147
]
HS1_002040
Enzymes [BR:
daw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HS1_002040
Messenger RNA biogenesis [BR:
daw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HS1_002040
Chaperones and folding catalysts [BR:
daw03110
]
Heat shock proteins
HSP60 / Chaperonin
HS1_002040
Mitochondrial biogenesis [BR:
daw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HS1_002040
Exosome [BR:
daw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HS1_002040
Exosomal proteins of other body fluids (saliva and urine)
HS1_002040
Exosomal proteins of breast cancer cells
HS1_002040
Exosomal proteins of colorectal cancer cells
HS1_002040
Exosomal proteins of bladder cancer cells
HS1_002040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
Motif
Other DBs
NCBI-ProteinID:
AMM41832
UniProt:
A0A7U4QM13
LinkDB
All DBs
Position
complement(2059168..2060805)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEIKYSVHAREAIIKGVDTLTNAVKVTLGPKGRNVILEKTFGAPQITKDGVTVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATIIAQAIFKEGAKMVAAGSNPMILKRGI
DKAVETVVEEMKKMSKPCHEKKEIAQVGTISANNDSSVGDIIAEAMEKVGKEGVITVEEA
KGIETTLEVVEGMQFDRGYISPYFVTDAEKMETHLEDPYILIHEKKISNMKDLVPLLESV
ARSGKPLLIIAEDVEGEALATLVINKLRGTLHCAAVKAPGFGERRKAMLQDIAILTGGQM
VSEELGIKLESVTLNDLGRARKVVIDKDNTTIIDGAGRKEDIEARIKQIRVQIEETTSDY
DREKLQERLAKLVGGVAVIRVGAATEVEMKEKKARVEDALNATKAAVEEGIVPGGGVTLI
RTLPVLQKLEDETKDLDEKAGIKIVMRAIEEPLRQIANNAGYEGSVIVEKVKAGKDDYGF
NAATGQFENLMSSGIIDPTKVTRTALQNAASIAGLLLTTEAMVAEKPEEKKEAAPGMPPG
GMPEY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaaattaaatacagcgttcatgcgagagaggccattattaagggtgtt
gataccctaactaatgctgtaaaggtaactttaggacctaaaggaaggaatgtcattttg
gagaagaccttcggtgcacctcaaatcactaaagatggagttacagtggctaaagaaatt
gagttaaaagacaagtttgaaaacatgggtgcccagatggtaaaggaagtagccagtaag
accagtgatgttgcaggcgatggcaccactacagctaccattatcgctcaagcaatattt
aaagaaggagccaagatggtagctgcgggaagcaaccctatgatattgaaaagaggtatt
gataaggcagtagaaacggtagtggaagaaatgaaaaaaatgagtaagccttgtcatgaa
aagaaagaaattgcccaagtaggcactatttctgctaataacgatagcagtgtaggagat
attattgctgaggccatggaaaaagtaggtaaagagggtgtaatcacagtagaagaggcc
aaaggtattgagactactttagaggtagtagagggtatgcaatttgaccgtggttatatt
tctccttatttcgtgactgatgcagagaaaatggagacgcatcttgaggacccttacatc
ctgattcatgaaaagaaaatcagtaatatgaaagatttggtgccattattggaatcagtg
gctaggtctggcaaacctttgttaattattgctgaggatgtagaaggggaagcattggcc
accttggttattaataaattaagagggaccctccattgtgcagcggtcaaggctcctggc
tttggagagagaagaaaggccatgcttcaagatattgctatcctaactggtggtcaaatg
gtttctgaggagttagggattaagctggaaagcgttactttgaatgatttgggtagagcc
agaaaagtagtcattgataaagataatactactatcattgatggtgcgggcaggaaagaa
gacattgaggcccgaatcaagcagattagagttcaaatagaagaaactacttctgattat
gacagagaaaaacttcaggaaagattagccaaactggttggaggtgtggctgtaattaga
gtgggagcagctactgaagtagaaatgaaagagaaaaaagccagggtagaagatgccctt
aatgctactaaagcagcagtagaagaagggattgttcctggtggtggagtaacgctgatc
cggactttacctgtattgcagaaactggaggatgaaactaaagatttagatgaaaaagca
ggcataaaaattgtgatgcgggctattgaagaaccgctgcgccaaattgccaataatgca
ggttatgaaggttcggttattgtagaaaaagtaaaagcagggaaggatgattatggcttt
aatgctgccacgggacaatttgagaacttgatgtcaagtggtattattgaccctacaaag
gtgactagaactgctttacagaatgctgctagcattgccggattgttgcttaccaccgaa
gccatggtagcggaaaaaccagaagaaaagaaagaggctgctccaggtatgcctcctggt
ggtatgcctgaatattaa
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