Candidatus Desulfofervidus auxilii: HS1_002362
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Entry
HS1_002362 CDS
T09963
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
daw
Candidatus Desulfofervidus auxilii
Brite
KEGG Orthology (KO) [BR:
daw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daw03400
]
HS1_002362
DNA repair and recombination proteins [BR:
daw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HS1_002362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
Lon_C
ChlI
DUF7125
RecA_N
GvpD_P-loop
AAA_22
nSTAND3
AAA_16
SLFN-g3_helicase
Rad51
AAA
AAA_14
AAA_24
nSTAND_NTPase5
CobU
NTPase_1
DUF7129
ABC_tran
AAA_5
ATPase_2
PAXNEB
HypA
Motif
Other DBs
NCBI-ProteinID:
AMM42144
UniProt:
A0A7U4TIM3
LinkDB
All DBs
Position
complement(2360815..2362167)
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AA seq
450 aa
AA seq
DB search
MAKEAKVQFICQECGYCSPKWLGKCPDCGGWNTFVEEISSLKPSSTSLDTPSTPIPITQI
DSLKLPRLKTGLLELDRVLGGGLVPGSVVLIGGAPGIGKSTLTLQALFNLTKQGLNTLYV
SGEESATQIKLRAERLHVEHPRLYLLTETALEHILSSIEKIDVQIVVIDSIQTMFTTALT
SAPGSVSQVREVTGKLVRLAKNRNISIFIVGHVTKEGAIAGPRMLEHMVDTVLYFEGEKG
HPHRILCAVKNRFGSTNEIGVFEMQEYGLVEVNNPSELFLAERPVNTSGSVIVPILEGSR
PILIELQALTSPSFLAMPRRTSIGVDPYRLNLLVAILEKKVGLNLGQQDIFFNVAGGVKI
EEPAADLGIVTAIASSFLNKPIPPQWVLLGEVGLTGEVRAITQAEIRLIEAEKMGFKQCI
IPQSNLKHLKKTPLPTIGIHKIEKAFEVLF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaagcaaaagtgcaatttatttgccaggagtgtggatattgctctcccaaa
tggttgggtaaatgtcctgattgtggggggtggaatacctttgtggaagaaatttcttcc
ttaaaaccttcttccacttctctagatacgccttccacccctattcctattacccagata
gattctctaaaattacctcggttaaaaacaggtctgttggaattagaccgggtattagga
ggaggattagtcccagggtcagtggtcttaattggtggtgcaccaggtattggaaagtca
acccttacccttcaagccttatttaacctcactaagcagggattaaatactctttatgtt
tcaggtgaagagtctgctactcaaattaaactcagggcggagcgtctgcatgttgaacat
ccaaggctctatttgctcactgaaaccgccttagaacatatcttaagcagtatagaaaaa
atagatgttcaaattgtagtaattgattccattcaaactatgtttactacggcgttgacc
tctgctccagggagtgtttctcaggtgagagaagttactggaaaattagtgcgtttggct
aaaaataggaatatttctatttttattgtaggtcatgtaaccaaggagggtgctattgct
ggcccaaggatgttggagcacatggtagatactgtgctttattttgagggagaaaaaggc
catccccatcgtattttatgtgcggtaaaaaaccgttttggttctactaatgagatagga
gtttttgaaatgcaagaatatggattagtagaagtgaacaatccttcagagcttttcctg
gctgagcgccctgtaaacacctctggttctgtgatagtgcccattttagaaggtagccgt
cctattttaatagaattacaggccttaaccagtcccagctttctggccatgcctaggcgg
acaagcattggagttgacccataccggcttaatctactggtggccattttagaaaaaaaa
gtaggccttaacttaggacaacaagatatcttttttaatgtagctgggggagtaaagata
gaagaacctgctgcagatttgggtatagtaactgctattgcttctagtttcttaaataaa
cccattccacctcaatgggttttactgggtgaagtaggtctcactggagaagttagagct
attactcaggcagaaattcgtttgatagaagcagaaaagatggggtttaaacaatgcata
atccctcagagcaacttaaaacatctaaaaaaaacccctttgccaactattggaatccac
aaaatagaaaaggcctttgaggtattattttaa
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