Desulfoglaeba alkanexedens: FDQ92_01225
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Entry
FDQ92_01225 CDS
T05964
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dax
Desulfoglaeba alkanexedens
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dax03016
]
FDQ92_01225 (truB)
Enzymes [BR:
dax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FDQ92_01225 (truB)
Transfer RNA biogenesis [BR:
dax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FDQ92_01225 (truB)
Prokaryotic type
FDQ92_01225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QCQ20939
UniProt:
A0A4P8KZH0
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All DBs
Position
238447..239415
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AA seq
322 aa
AA seq
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MIDEPLAPPSPGEPATAADQTLVEDGVLLIDKPASMTSHTVVDKVRRWLRVRKAGHCGTL
DPFATGLLVVCVNRATRIADLLTGDDKVYRFEMQLGVETDTHDPTGEEIRRHQGAPVARE
DFAAVLERFRGSILQEVPAHAAVKVRGRRLYEWTRSGVDVERPSRRITIHRLELVHYHWP
LAVLDLRCSKGTYVRRLAADIGNMLGCGAHVTRLTRLASGPFHLDAAVSMEEVQSWRAQP
QWQSRLIPIHRALDHLPRIIVEDEHLRRRLRQGILDPVWEEQHRQAAEAGDLPVCLVSPE
GGLLALWRPAAPDRKRQLRVFS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgaaccgcttgcacctccaagccccggggaaccagcgaccgccgcggaccaa
acactcgtcgaagacggcgtgctgctcatcgacaagcccgcctccatgacttcccacacg
gtggtcgacaaggttcggcggtggctccgggtcaggaaggccgggcactgcggcacactg
gacccgttcgccaccgggcttctggtggtgtgcgtgaaccgggccacccgcatcgcggat
ctcctaaccggcgacgacaaggtctaccgcttcgagatgcaactcggcgtggaaacggac
acccacgatcccaccggcgaagagatccgccgccaccagggcgcaccggtcgcccgggaa
gacttcgcggcggtcctggaacggttccggggttctatcctgcaggaagtgccggcgcac
gcggccgtcaaggtcaggggacgcaggctctatgagtggacccgttccggcgtggacgtg
gaacgtcccagccgtcgcatcaccatccaccggctggaactcgtccattaccactggccg
ctcgctgttttggaccttcgctgctcaaagggaacctatgtccgccggcttgcggcagat
atcggaaacatgctgggctgcggcgctcatgtcacccggctgacccgactggccagcggc
ccgtttcacctcgatgcagcggtaagcatggaagaggtccagtcatggagggctcagccc
cagtggcagtcccgcctcattcccatccaccgcgccttggaccacctgccccggatcatc
gtcgaagatgagcatctgcggagacggctccggcagggaatcctggatccggtctgggag
gaacagcatcggcaagccgccgaggccggggacctccccgtgtgcttggtgagccccgaa
ggcggactcctggctctctggcggcctgccgcaccggaccgaaaacgtcagttgcgggtc
ttttcttga
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