Desulfoglaeba alkanexedens: FDQ92_01730
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Entry
FDQ92_01730 CDS
T05964
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FDQ92_01730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dax03021
]
FDQ92_01730
03400 DNA repair and recombination proteins [BR:
dax03400
]
FDQ92_01730
Enzymes [BR:
dax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FDQ92_01730
Transcription machinery [BR:
dax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FDQ92_01730
DNA repair and recombination proteins [BR:
dax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FDQ92_01730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QCQ21030
UniProt:
A0A4P8L010
LinkDB
All DBs
Position
complement(354601..355611)
Genome browser
AA seq
336 aa
AA seq
DB search
MQKNWRDLIRPKRLEVEAGERPDRHGKFICEPLERGFGTTLGNALRRTLLSSLRGAAITD
VKIDGVLHEFSSVPGVLEDVTDIILNLKEVRLKVKGETPRTFLIEKEGEGVVTAADIRGN
SGLQVLNPEKHICTLAKDGKLRMELTVKDGKGYVPADWETSEDLPIGAIPIDAVYSPIQK
VNYVVTQARVGQRTDYDKLTIEIWTDGSVTPEDALAFAAKILKEQLSVFINFEEGVEPSE
DEYTEEEPPFNEHLFRSVDELELSVRSANCLKNADIRYIGELVQKSEGEMLKTKNFGRKS
LNEIKEILSEMGLSLGMKLDSFPSREEIEARRKEEE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaactggcgcgacttgattcggcctaaacgcttggaagtggaagcgggagaa
cgacccgatcgacatggaaagttcatctgtgagccgctggaacggggcttcggaaccaca
ctgggaaatgccctgcggcggacgctgctttcctccttgagaggcgccgccattacggac
gtgaagatcgacggcgtcctccatgaattttcatcggtgcccggggtgcttgaagacgtt
acggacatcattttgaatctcaaggaagtccgcctgaaggtcaagggggaaacgcccagg
acgttcctgatcgaaaaggagggcgaaggggtcgtcaccgccgccgacattcggggtaac
tcgggcctacaggtgctcaacccggaaaagcatatctgtacccttgccaaggacgggaag
ctgcgcatggaattgaccgtcaaggatggcaaaggttatgtgcctgcggattgggaaacc
agcgaagatctccccatcggggcgattcccattgatgcggtctattcgccgatccagaag
gtgaattacgtcgttacccaggcacgcgtcggacagcgcaccgattacgacaagctgacc
atagagatctggacggatggcagcgttacgcccgaagacgcgctggcctttgcggcgaag
attctgaaagaacagttgtcggttttcatcaatttcgaggaaggcgtggaaccctccgag
gacgagtacaccgaggaggagccgcctttcaacgaacacttgttccggagtgttgatgaa
ctggaactctcggttcgttcggccaattgtctcaagaacgccgatatccgctacatcgga
gaattggttcagaagtcggaaggcgagatgctcaagacgaagaatttcggccgcaagtcg
cttaacgaaatcaaggagatcctcagtgaaatggggttgtcgctcggtatgaaactggat
agttttcccagtcgggaagagatcgaggcacgcagaaaggaagaagagtag
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