Desulfoglaeba alkanexedens: FDQ92_04175
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Entry
FDQ92_04175 CDS
T05964
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dax
Desulfoglaeba alkanexedens
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dax03032
]
FDQ92_04175 (topA)
03400 DNA repair and recombination proteins [BR:
dax03400
]
FDQ92_04175 (topA)
Enzymes [BR:
dax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FDQ92_04175 (topA)
DNA replication proteins [BR:
dax03032
]
Prokaryotic type
DNA Topoisomerases
FDQ92_04175 (topA)
DNA repair and recombination proteins [BR:
dax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FDQ92_04175 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QCQ21441
UniProt:
A0A4V1ERF3
LinkDB
All DBs
Position
complement(863466..865739)
Genome browser
AA seq
757 aa
AA seq
DB search
MSKSLLIVESPTKARTLNRYLGKNFVVKASVGHVKDLPETKLGIDIENQFRPEYQVIRGK
KKVLKELKDAAEKADAIYLGPDPDREGEAIAWHIAEELDTGHKPVHRVLFYELTHKAIQE
ALKKPEPLNRSLYDAQQARRILDRLVGYLISPLLWEKVKRGLSAGRVQSVALRLVCERER
EIQRFVPEEYWTVTARMAAQEKETVEGEKGEPKPFEARLWRCRRKKCELGNEEETRALVE
ILKGLSYQVASVERKKRLRKPAPPFITSTLQQEAARKLRFTAKRTMSIAQRLYEGVELGD
EGAVGLITYMRTDSTRLSEEAVNAAREYIGERWGSRYLPGNPVIYKAKGSAQDAHEAIRP
TDVRRTPEAVAPFLPKEQLALYSLIWSRFVACQMASAQLAQTTIDISGGDFIFRVTGSII
EFPGFMVLYVEGRDDDGEEKEGEAILPELQVGQAVDLLELLPKQHFTQPPPRFTEATLIK
ELEERGVGRPSTYAAILSTIIDRQYVSLARQRLHPTELGLIINDLLVKHFSEVVDVDFTA
RMEKNLDEVEQGRHPSQQLLVEFYDRFSKTLAAAASKMQNLRTEGLVTGLDCPRCGRPLL
IKFSRNGPFVTCSGYPECTFSSNYERDEKGGVRLLEDTVSGEVCDKCGRPMVVRRGRYGE
FLACSGYPECKNTRPVSTGIPCPREGCEGELVERMSKKGRKFFGCNKYPECKMVFWDLPV
RRTCPQCGSPVMIEKNTKKEGKKWICPRPGCGYQAKE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgctgctgatcgttgaaagtcctacgaaagcccggacactcaaccggtat
ctgggcaagaacttcgtggtcaaggcctccgtgggtcatgtgaaggatttgccggaaacc
aagctgggcatcgatatcgaaaaccagtttcggccggaataccaggtcatccgcggtaag
aagaaggtgctcaaggaactgaaagacgccgctgagaaagccgatgccatctacctgggc
ccggacccggaccgcgaaggggaagccatcgcctggcacatcgccgaagaattggacaca
ggccacaagccggtccaccgggtgctcttctacgaactgacccacaaggcgatccaggag
gcgctgaagaagccggagcctctcaaccgatccttgtacgacgcgcagcaggccaggcgc
atcctcgaccgcctggtgggatatctgatttccccgctcctgtgggaaaaagtgaagcgg
gggctgagcgcagggcgggtgcaatcggtggccctgcgactggtctgtgaacgcgaaaga
gaaatccagcgcttcgtccccgaagaatactggaccgttacggcgcgcatggcggcgcag
gaaaaggaaacggtcgagggggagaagggggagccgaaacccttcgaagcgcgcctgtgg
aggtgccgcagaaagaagtgcgaactgggaaacgaagaggagacacgcgctcttgtcgag
atcctcaaggggctctcgtaccaggttgcgtcggtcgaacggaagaagcgccttcgaaag
ccggcgcctcctttcatcacgagcaccctgcagcaggaggcggcccggaagctccgtttc
accgcgaaacgcaccatgagtatcgcgcagcggctgtatgaaggcgtggaactgggcgac
gagggcgcggtgggactcatcacctacatgaggaccgattccacgcggctttcggaggaa
gcggtgaacgcggcccgtgaatacatcggcgaacgctgggggagccgctacctgcccggg
aatcccgtgatctacaaggccaagggcagcgcccaggacgctcacgaggccattcggccc
acggacgtgcggcgcactccggaagctgtggctccgttcctccccaaggagcagttggcg
ctctattcgctgatctggagccgcttcgtggcctgccaaatggcttccgcgcagctggcc
cagaccaccatcgacatctcgggaggcgactttatcttccgggtgaccgggtccatcatc
gagtttccgggtttcatggtgctttacgtggaaggccgggacgacgatggagaagaaaag
gaaggggaggcgatccttcctgaactccaggtgggccaggccgtggacctgctggagttg
ctgccgaagcagcacttcacccagccgccgccccgctttacggaagcgactctgatcaag
gagctggaggagcgcggggtggggcggccgagcacctatgcggccatcctttccaccatc
atcgaccggcagtacgtttcgctggcgcggcagaggcttcatcccacagaactgggactc
atcatcaatgatcttttggtgaagcatttttccgaagtggtcgatgtggattttacggcc
aggatggaaaagaacctggacgaggtggaacagggacggcacccgtctcagcagctgctc
gtggagttctacgacaggttcagcaagacgctggcggctgcggcctccaagatgcagaac
ctgaggaccgaggggttggtcaccggcttggattgcccgcgatgcgggcgcccgctgctc
atcaaattcagtcgcaacgggccgttcgtcacctgcagcggataccccgagtgcacgttc
agttccaactacgagcgggacgaaaagggcggggtgagactcctggaagacacggtatcc
ggggaggtgtgcgacaagtgcggtcggcccatggtcgtgcggcgcggccgctacggtgaa
ttcctggcctgcagcggctatcccgagtgcaagaacacgcggccggtgagtacggggata
ccatgtccgcgggaaggctgcgaaggcgagctcgtcgaacggatgagcaagaaggggcgg
aagtttttcggatgcaacaagtacccggagtgcaagatggtgttctgggatcttccggtc
cggaggacctgtcctcaatgcgggtcgcccgtcatgatcgaaaagaacaccaagaaagaa
ggcaaaaagtggatctgcccgcgtcccggctgcggctaccaggcgaaagaatga
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