Desulfoglaeba alkanexedens: FDQ92_04305
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Entry
FDQ92_04305 CDS
T05964
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax00550
Peptidoglycan biosynthesis
dax01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FDQ92_04305
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dax01003
]
FDQ92_04305
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dax01011
]
FDQ92_04305
Enzymes [BR:
dax01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
FDQ92_04305
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FDQ92_04305
Glycosyltransferases [BR:
dax01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
FDQ92_04305
Peptidoglycan biosynthesis and degradation proteins [BR:
dax01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
FDQ92_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QCQ21466
UniProt:
A0A4P8L0U6
LinkDB
All DBs
Position
complement(893294..895585)
Genome browser
AA seq
763 aa
AA seq
DB search
MTAKKKKNRSGKPPKTGGRRARWLKALLVFGTVIVFLGGGIFVYLAVQVDKRFGAKRWSV
PATILSDTVILYPGRSLSLTDVTQMLERRLYRPSKTGDLKPGEFHAGRDRLKVYFRDSQL
PGKRLPSRLVTLQFQNGRLKAIASPQEPLPYLEIEPVVLDRLFGPERESRHLVNIRQVPQ
HLLDAVTAIEDHRFFEHPGVDWWAILRALWTDLRAGRVVQGGSTITQQLVKNYFLSSERT
LRRKVMEAALALVIEVRYSKEEILEMYLNEIYLGQRGSVAVHGVGEAARYYFGRNVEDLT
LAESAVLAGMIRAPNRYSPYRNPDACKERRAMVLHRMREIGKISPEELEAALSEPITVAP
SHLPVKAAPYFTDYVRYQLEELYEPEVLASEGLLVHTSLHPELAFAAERAVAEGLRELEK
ARPKLKASDPEKALQAVLLAVQPRTGEVLALVGGRDYAVSNYNRALFARRQPGSAFKPFV
YLAALDQFTAVSWLLDEPITYRTNGDLWSPRNYDGRYRGRVLFRDALAHSLNAATVNLAM
QVGLERIIATARALGIQSEMRPFPSLALGSFEVTPLELATAYATLANDGQRPFLLSLRRV
VTAEGTVEQRRYMDLESVTSPAKAFLITHLLQAVVQEGTARRALSMGIDFPCAGKTGTTS
DYRDAWFVGYTSDLLVLVWVGFDDNRSTGLSGSSGALPIWIRFMKSVEPWMNPREFQIPP
GVVERLVCPVSGELATQYCPERIIEYFLPENTPRSACSYHAPR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaagaaaaagaaaaacaggagcggaaagcccccaaagacgggtggaaggcgg
gcccggtggctcaaagccttgctggttttcgggacggtaatcgtgtttctgggcggcggc
atcttcgtctacctggccgtccaggtggacaagcggttcggggccaagagatggagtgtc
cccgccacgatcctttccgatacggtgatcctctaccccggccgctcgctttctcttacc
gacgtcacgcagatgctcgaaaggcggctttatcggccttcgaagaccggtgacttgaag
cccggggagtttcatgcgggccgggatcggctgaaggtctacttccgggattctcagctt
ccggggaaaaggctcccctcccgactggtgacgctccagtttcaaaacggacggctgaag
gccatcgcgtcgccgcaggagccgcttccctacctggaaatcgagccggtggtgctggac
cggttgttcgggccggagcgggaaagccggcatctggtgaacatccgccaggtgccccag
cacctgctggacgcggtgaccgccatcgaggatcaccggttctttgaacatcccggcgtg
gattggtgggccatcctgagggccctgtggacggacctcagggccggccgcgtggttcag
ggcggttccaccattacgcagcaattggtgaagaactattttctttcctccgaacggacg
ctgcgccgcaaagtcatggaagccgcgctcgccctggtgattgaagtccgctacagcaag
gaagaaatcctcgagatgtacctgaacgaaatctacctcgggcagcgcggcagcgtggcc
gttcacggggtgggggaagcggcccggtactacttcggacggaacgtggaagacctcacc
ctggctgaatccgcggtgctggccggcatgatccgtgccccgaaccgatattccccgtac
cgtaacccggacgcctgcaaggaacgccgcgcgatggtgttgcaccgcatgcgggagatc
gggaaaatctcaccagaggagctcgaggccgcgctttcggagccgatcacggtggccccg
tctcatctgccggtcaaggcggcgccctatttcaccgattacgtccggtatcagctcgag
gaactctacgagccggaagtcctcgcttccgaagggctcctggtccacacgagccttcac
ccggaactggccttcgccgcggagcgggccgtggcggaaggacttcgggagttggaaaag
gcgcggccgaaactcaaggcttccgatccggagaaggcccttcaggcggtcctgctggcg
gttcagcccaggacgggggaggtcctggcgttggtcggagggcgggactacgccgtgagc
aattacaaccgagcgctgttcgcccggcggcagccgggatcggccttcaagccttttgtc
tatctcgcagcgcttgaccagttcacagccgtgagctggctcttggacgaaccgatcacc
taccggaccaacggagacctctggtctccccgaaactacgacggccgttatcgggggcgg
gtactgttccgagatgccctcgcccattcgttgaacgccgcaacggtcaacctggccatg
caggtgggactggaacggatcatcgctacggcgcgcgcccttgggattcagtccgaaatg
cgcccgtttccctcgctggccctggggtctttcgaagtcacgccgttggaactggccacc
gcctatgccacactcgccaacgacgggcagcgtcccttcctcttgagtcttcggcgcgtg
gtgaccgccgaagggacggtggagcaacgccggtacatggacctggaatccgtgacgtct
ccagccaaggcgttcctgatcactcacctgctccaggcggtggtgcaagagggaaccgcg
cggcgcgccctttccatgggaatcgattttccctgcgccggtaagaccggtaccaccagc
gactatcgggacgcgtggttcgtgggctacaccagcgacctgctggtgttggtctgggtg
ggattcgacgacaatcgttccacggggctgtcgggttccagcggcgcgcttcccatctgg
atacggttcatgaaaagtgtggaaccctggatgaatccgagggaattccagatccccccg
ggggttgtggaacgtctcgtgtgcccggtttcaggggagctggccacgcagtactgtccg
gaaaggatcatcgaatattttctgcctgaaaacacaccaaggagtgcctgcagttaccat
gcgccgaggtag
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