Desulfoglaeba alkanexedens: FDQ92_08325
Help
Entry
FDQ92_08325 CDS
T05964
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FDQ92_08325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dax02022
]
FDQ92_08325
02035 Bacterial motility proteins [BR:
dax02035
]
FDQ92_08325
Two-component system [BR:
dax02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
FDQ92_08325
Bacterial motility proteins [BR:
dax02035
]
Pilus system
Twitching motility proteins
FDQ92_08325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_19
AAA_16
AAA_2
AAA_22
AAA_30
AAA_3
AAA_7
nSTAND3
TIP49
PIF1
DUF815
ATPase
Motif
Other DBs
NCBI-ProteinID:
QCQ22164
UniProt:
A0A4P8L342
LinkDB
All DBs
Position
complement(1842057..1843463)
Genome browser
AA seq
468 aa
AA seq
DB search
MTTPAERTPRILIVDDERSMREFLEIMLLKEGYAVRSAVHGQEALDILAKERFDLVITDI
RMKPVGGLEVLKGCKARYPNTVVIIISAYASTETAVAAMKEGAYDYLPKPFKIDEMRTVI
RNALQSRGEEPLPADRQGPLYYGCLIGESPPMRRVYELIERVAKTSSNVLITGESGTGKE
LVAKAIHRQSPRHDRPFVAVNCGGVPESLIESELFGFKRGAFTGAAATHKGLVEAAQGGT
LFLDEIGELSPTLQVKLLRLVQEKTVRMIGDTDDIPVDVRIVSATNRDLEAMVIEGAFRE
DLYYRLNVIQLRLPPLRERREDVPLLAEYFLDKFRKEFQKDIKKISSYAMDILKGYDFPG
NVRELENIIERGVALESSSIILPDSLTLASFKRGRQPEAGGFLPSLPPEGLDLNHFLADI
EKEILVQALNQARGVKQRAAELLGLTFRSFRYRLLKYGLTSEDEPKEG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacccgccgaacgaacgccccgcattctgatcgttgacgacgaaaggagcatg
agggagtttcttgagatcatgcttctcaaggaaggctacgccgtgcgttccgccgttcac
gggcaggaagctctagatattcttgcgaaagaacgcttcgatctggtcatcaccgacatc
cgcatgaagcccgtcggcggcctggaggttctcaaaggctgcaaagcacggtaccccaac
acggtggtcatcatcatttcggcttacgccagtacggaaacggccgtggccgccatgaag
gaaggggcctacgattatctgcccaaacccttcaagatcgacgaaatgcggacggtcatc
cgcaatgccctccagagccggggggaagagccgctgccagccgatcgccaggggcccctt
tactacggttgcctgatcggcgaaagcccccccatgcgaagagtctacgaactgatcgaa
cgcgtggcgaagacgagcagcaatgtgctcatcaccggcgagagcggaacgggaaaggaa
ctggtggccaaggccatacaccgccaaagcccgcgccatgaccgcccgtttgtggcggtc
aattgcggcggggtccccgaatcgctcatcgaaagtgaactgttcggcttcaaacgggga
gcgttcacgggagccgccgcgacgcacaaaggcctggtggaagccgcccagggcgggacc
cttttcctggacgagatcggggaactgtcgcccacactccaggtgaagctgttgcggctc
gttcaggaaaagaccgttcggatgatcggcgataccgacgatattcccgtggacgttcgg
atcgtttccgccaccaatcgagacctggaggccatggtcatcgagggcgcgtttcgcgaa
gatctctattacaggttgaatgtgatccagttgaggctgccgcctctcagggaacgccgt
gaagacgtcccgcttctcgccgagtattttctcgacaagttccggaaagaattccagaag
gacatcaagaagatctcctcgtacgccatggacattctcaaaggctacgattttcccgga
aacgtgcgcgagttggaaaacatcatcgagcgcggcgtggctctcgagtcttcaagcatc
atccttcccgacagcctcacactggcttccttcaaacgcgggcggcaaccggaagccggc
gggttcctgccgtcgcttccaccggaaggcctcgatctcaatcactttctcgccgacatc
gaaaaggagatcctcgtgcaggcgctgaaccaggcgcgcggcgtcaagcagagggccgcc
gaactcctggggcttaccttccgctccttccgttaccgtctcctcaaatacggactgact
tccgaagacgaacccaaagaaggctga
DBGET
integrated database retrieval system
