Desulfoglaeba alkanexedens: FDQ92_08350
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Entry
FDQ92_08350 CDS
T05964
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax03030
DNA replication
dax03430
Mismatch repair
dax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDQ92_08350 (holA)
03430 Mismatch repair
FDQ92_08350 (holA)
03440 Homologous recombination
FDQ92_08350 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dax03032
]
FDQ92_08350 (holA)
03400 DNA repair and recombination proteins [BR:
dax03400
]
FDQ92_08350 (holA)
Enzymes [BR:
dax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDQ92_08350 (holA)
DNA replication proteins [BR:
dax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FDQ92_08350 (holA)
DNA repair and recombination proteins [BR:
dax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FDQ92_08350 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QCQ22168
UniProt:
A0A4P8L2U9
LinkDB
All DBs
Position
complement(1846933..1847934)
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AA seq
333 aa
AA seq
DB search
MNAFQFYRHLKESTPVPVYLFKSDSDFLVDEAWRRLVRSVVPEGARRFNGERLDASQVSA
AQVVERLRTLAMFGSKRLVMVDRPDQWNKAQQEAVAAYTSRPNPRACLVLAVPLKKTPKI
LETAVGAAGLVVEFSAPGEKQAPRWIQQRAQALGKVLTAPAAELLVQKVGPDLPALQAEL
EKLALYAGERTEIDAEDVDRVVGQNRSVTVFEMVRAAGSRKPREALLALHRLLEEGEPPL
AVLAILAREVRILWGIKDGLGLGLAPQEIAQRLQVPLFVVSRQQRSSESFSDDELADVHR
RLQDLDYALKSSQVDPVKALESIVYRLSTKKGP
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctttcaattctaccggcacctgaaggaatcgaccccggtgccggtgtatttg
ttcaagagtgattccgattttctcgttgacgaggcgtggcggcggcttgtccgttcggtt
gtccccgagggggcacggcgttttaacggtgaaaggctggatgcttctcaggtttcagcg
gcccaggtggtggaaaggctccgcacgctcgccatgttcgggtcgaaacgcctggtgatg
gtcgaccgcccggatcagtggaacaaggcgcagcaggaggccgtcgccgcctacacgtcc
cgcccgaacccccgggcgtgcctggtcttggctgttcccctgaaaaagacccccaagata
ctggagacggccgtgggtgccgccggcctggtggtggaattttcggcgcccggcgaaaag
caggcgccgcgatggattcagcagcgcgcgcaggcgttggggaaggtactgaccgctcca
gcggcggaacttctggttcagaaggtgggtcccgatcttccggcattgcaggcggagctg
gaaaagttggcgctttacgcgggtgagagaaccgagatcgatgctgaggacgtggaccgt
gtggtggggcagaaccggtcggttacggtctttgaaatggttcgcgcggctggttctcga
aaaccgcgggaggcgcttctggcgcttcaccggctgctggaggaaggagagcctccgctg
gccgttctggctatactggcccgggaagtacgcatcctgtgggggatcaaggacgggttg
gggctgggcctggcccctcaggaaatcgcccagcggctccaggtgcctctcttcgtggtg
tcccggcagcagcgttcctcggagtctttcagcgacgacgagctggccgacgtccaccgc
aggcttcaggatctggactacgcattgaaaagctcccaggtcgatccagtaaaggccctg
gaatccattgtttaccgtctatccacgaaaaagggcccgtga
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