Desulfoglaeba alkanexedens: FDQ92_09270
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Entry
FDQ92_09270 CDS
T05964
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
dax
Desulfoglaeba alkanexedens
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dax03019
]
FDQ92_09270
03009 Ribosome biogenesis [BR:
dax03009
]
FDQ92_09270
Messenger RNA biogenesis [BR:
dax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FDQ92_09270
Ribosome biogenesis [BR:
dax03009
]
Prokaryotic type
rRNA processing factors
FDQ92_09270
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
CCDC24
MPS1
S1
eIF-1a
Antiterm
zf-CCHC
Motif
Other DBs
NCBI-ProteinID:
QCQ22330
UniProt:
A0A4P8L3A3
LinkDB
All DBs
Position
2041827..2043410
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AA seq
527 aa
AA seq
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MTAELIINADFYETRVALVENGQVAELYIERASDTGIAGNIYRGRVVRVLPGMQAAFVDI
GLEKAAFLYVSDVHHPLMEAEDLFREPREPDAVPQEGPPAAAGTLEELAAADLAPDSNGT
PRSYSDVPIEDRLQEGQDVLVQVAKEPLGSKGARITTHITLPGRNLVLMPMMDHVGVSRR
IENEKERKRLRDMVCAIKPAHCGFIVRTAAEGEDMEKIHAEMDFLLKLWQNVQKRAETAA
VPSLVYQELDITLRAVRDLLTKEVDRLVIDSEEGYREIVNFTENFMPSLRSAVERYDGKE
PIFDAYGIEMEVQRALSKKVWLKSGGYIVIETTEALTAVDVNTGRYVGKRNLEETILKTN
LEAVREIAYQLRLRNIGGIIIIDFIDMEKEANRQKVFNALKEAMRRDKSKTNILRMSDLG
LIEMTRKRTKESIGRVLCEPCYYCEGEGHLKSPQTVCYEILRELQRDSQDLFGRNLMILV
HPHVATRFLDEERVVLEHFEEKLHASIQVKGEKSLHLEQYEMRVLDV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaactcattatcaacgctgatttttacgaaacccgggtcgccctggtggaa
aacgggcaggtggcggaactctacatcgagcgggcctccgatacggggatcgccggaaac
atctaccgaggccgcgtggtccgggtgcttcccgggatgcaggcggccttcgtggatatc
ggcctggaaaaggcggctttcctctatgtgagtgacgttcatcacccgctgatggaggcc
gaggatctgtttcgagaaccccgtgagcccgatgccgtgcctcaggaaggcccgccggcg
gccgccggcaccttggaggaacttgccgccgcggatctcgcccccgattcgaacgggacg
cctcgcagctacagcgatgtgcccatcgaggaccgccttcaggaggggcaggacgtcctg
gtccaggtggccaaagagcctctcggcagcaagggggcccgcatcaccacccacatcacg
cttcctggaagaaacctggtgctcatgcccatgatggaccatgtgggcgtctcgcggcgc
atcgaaaacgaaaaggaacgcaagcggctgcgggacatggtctgcgccatcaagccggcg
cactgcgggttcatcgtccgcacggcggcggaaggcgaggacatggaaaagatccacgcc
gaaatggacttcctcctgaagctctggcagaacgtgcaaaagcgggctgaaacggcggcg
gtgccttccctggtctatcaggaactggatatcaccctgcgggcggtgcgggaccttttg
accaaggaagtcgaccgcctggtgatcgacagcgaggaaggataccgcgagattgtcaac
ttcacggaaaacttcatgccttcgcttcgaagcgccgtggaacgctacgacggcaaggag
cccattttcgacgcctacgggatcgaaatggaagtgcagcgggccctcagcaagaaagtc
tggctcaaatcgggcggctacatcgtgatcgagaccaccgaggcactcaccgccgtggac
gtgaatacgggccgctacgtgggcaagcggaacctcgaggagaccatcctcaagaccaac
ctggaggccgtgcgggagatcgcctaccagctccggctccgcaacatcggtgggatcatt
atcatcgactttatcgacatggaaaaggaagccaaccgtcaaaaggtgttcaacgccctc
aaggaagccatgcgtcgcgacaagagcaagaccaacatccttcgcatgtcggacctgggg
ctcatcgaaatgacccgaaagcgcaccaaggaaagcatcgggcgcgtgctgtgcgagccg
tgttattattgcgaaggggaagggcacctgaagtcccctcagacggtctgttacgaaatc
cttcgcgaactgcaaagagacagccaggacctgttcggccgaaacctcatgattctggtc
catccccatgtggcgacgcgctttctggacgaagagcgggtggtcttggagcatttcgaa
gaaaagctgcacgcatccatccaggtgaagggcgagaaatccctgcatctggagcagtat
gaaatgagggtgctggatgtgtga
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