Desulfoglaeba alkanexedens: FDQ92_09580
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Entry
FDQ92_09580 CDS
T05964
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax03030
DNA replication
dax03430
Mismatch repair
dax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDQ92_09580 (dnaE)
03430 Mismatch repair
FDQ92_09580 (dnaE)
03440 Homologous recombination
FDQ92_09580 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dax03032
]
FDQ92_09580 (dnaE)
03400 DNA repair and recombination proteins [BR:
dax03400
]
FDQ92_09580 (dnaE)
Enzymes [BR:
dax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDQ92_09580 (dnaE)
DNA replication proteins [BR:
dax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FDQ92_09580 (dnaE)
DNA repair and recombination proteins [BR:
dax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FDQ92_09580 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCQ22388
UniProt:
A0A4P8L3E0
LinkDB
All DBs
Position
complement(2105203..2108697)
Genome browser
AA seq
1164 aa
AA seq
DB search
MAQPSFVHLHVHSEYSLLDGAIRLADLLDTARSYGMPAVAVTDHGGMFGALEFYEKAKKA
GINPIVGCEVYVAPKSRFDRQAAPGPNGDEDRNHHLVLLAENDAGYRNLMKLVTLAHLEG
FYYKPRVDKELLRAHNQGLIALSGCLKGEVASNLLQGRKATAVKAAEEYAAIFGPDRYYL
ELQANGIPEQATVNEGLIQLARDLGLPLVATNDCHYLRRSDARAHELLLCIQTGKTILDQ
KRMKFSTDQLYFKSPEEMAREFAHVPEALENTVRIADRCRLEIPLGEYHFPVFPLEEGES
IEDRFEKEVLEGFERRLKQIQKRRPHFGSREREEYDKRLRYEIDVIREMGFAAYFLIVAD
FIGYAKKQGIPVGPGRGSAAGSLVAYVMEITDLDPIEHGLIFERFLNKERISMPDIDVDF
CIHGRDDVHRYVSEKYGSDRVAHITTFGTMQARAVIRDVGRAMGMAYGDVDRIAKLIPAS
PGMTLKKAFELEPRLAEIQRDDPQVRELFEVAFALEGLPRHVSTHAAGVVIGDRPIVEYM
PLYRDQDGEIVTQYSMKYVEKAGLIKFDFLGLRNLTVIHNAVKLIEKNHGIQLNMEELPL
DDSETYALLSRADTTGVFQLESSGMRDIMVRLHPENFADIVALVALYRPGPLESGMVEQY
IDGKHGKIDITYELEALRPILESTYGVILYQEQVMKIASVLANYTLGEADILRRAMGKKI
PEVMEAQRQRFLDGAKANGIDLAKANHIFDLMAKFAGYGFNKSHSAAYALIAYQTAYLKA
HYPVEFMAALLNSVLSNTDQVVKLMNECHDKGIEVLPPDVNLSDRDFTVVEGKIRFGLAA
VKNVGESAIESILRSRNNEGAFRSIYDFCERVDTQRVNRRVIEQLIKCGAFDSIHNSRAS
TFAALDTALERAQVVQRDRQSGQLNMFELLRNRKRAASPPLPDVPAWDSRTTLQYEKESI
GFYVSGHPLDHYADQLATLCSADSQRVREKPEGTQAILCGLISVTKELTTKRGERMAFLT
LEDKLGTLEVVAFPEVFSQSRELLEQDEPKVVIGTVQHDEKGSKVIAERILTLEDAQVEA
VESVRIHLKAEQLNRDTIERLRHLLISHAGECETFLHVDVEREAEAVIALNAKLRVNPTA
SFFLEMGRHFGEGTAEPVLRMCRQ
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaccttctttcgttcatctccacgttcacagcgagtacagcctcctggacggc
gcgatccgactggccgatcttctggacacggctcgaagctacgggatgccggcggtggcg
gtcaccgaccacggcggcatgttcggagccctggaattctacgaaaaggccaaaaaagcg
ggcatcaatcccattgtgggatgcgaagtgtacgttgcgccgaaaagccgtttcgatcgg
caggcggcgcccgggcccaacggcgatgaagaccgaaaccatcaccttgtgctgcttgcc
gaaaacgacgccggttaccgcaacctcatgaagcttgttaccctagcgcacctggaaggc
ttttactacaaaccgcgggtggacaaggagctgctgcgggcccacaaccaggggctcatc
gccctttcggggtgcctcaaaggggaagtggcttcgaatctcctccagggacggaaggcg
acggccgtcaaagcggcggaagaatacgcggccattttcgggccggaccggtactacttg
gaactccaagccaacggcatcccggaacaggccaccgtgaacgaaggcctcatccagctg
gctcgagacctagggctcccgctggtggccaccaacgactgtcactacctgcgccggagc
gacgcccgtgcccacgaactgctgctttgtatccaaacgggaaagaccatccttgaccag
aaacggatgaagttttccaccgaccagctctacttcaagtctcccgaagaaatggcccgg
gaattcgcccacgttcccgaagcgctggaaaacaccgtgcggatcgcggaccgctgccgt
ctcgagatccccttgggcgaataccatttcccggtgtttcccttggaagagggcgaaagc
atcgaagaccgtttcgaaaaggaagtcctggaaggcttcgagcgccgcctaaagcagatc
cagaaacgccggccgcatttcggctccagggagcgcgaggaatacgataagcggctccgc
tacgaaatcgacgtcatccgggagatgggcttcgccgcctacttcctcatcgtggccgac
ttcatcgggtacgcgaaaaagcagggcatccccgtagggccgggccgcggatccgccgcc
ggaagcctggtcgcctacgtcatggagatcaccgacctcgaccccatcgaacacgggctc
atcttcgaacggttcctcaacaaggaacgcatcagcatgccggatatcgacgtggacttc
tgcatccacggccgggacgatgtgcaccgttacgtttcggaaaaatacgggtcggaccgg
gtcgcacacatcaccaccttcggaaccatgcaggcgcgagccgtgatccgcgatgtgggc
cgcgccatgggcatggcctacggcgacgtggaccgcattgcgaagctcatcccggcttct
cccggcatgacgctcaagaaggcctttgaactggaaccgcgcctggccgaaatacagcgc
gacgacccgcaggtgcgggaactcttcgaagtggctttcgccctggaaggcctgccccgg
catgtgtccacccacgcggccggcgtcgtcatcggcgaccggcccatcgtcgagtacatg
ccgctctaccgggaccaggacggagagatcgtcacgcaatattcgatgaagtacgtggaa
aaagccgggctcatcaagttcgatttcctggggcttcggaacctcacggtcatccacaat
gccgtgaaactcatcgaaaagaatcacggaatccagctcaatatggaggaactcccgctg
gacgactcggaaacctacgcgctgctttcgcgggcggacaccaccggggtgttccaattg
gaaagctccggcatgcgcgacatcatggtccggctgcacccggaaaattttgcggacatc
gtggcgcttgtcgcactctaccggccgggacccctggaaagcggcatggtggagcagtat
atcgacggcaaacatggaaaaatcgacatcacttacgagctggaagcgttgcggccgatc
ctggaatccacctatggggtgatcctctaccaggaacaggtgatgaagatcgcgagcgtc
ctcgccaattacaccttgggcgaagccgacatcctcaggcgggccatgggaaagaagatc
ccggaagtgatggaggcgcagcgccagaggttcctggacggggccaaggccaacggaatc
gacctggccaaggcgaaccatatcttcgacctcatggcgaagttcgccggatacggcttc
aacaagtcccacagcgccgcctacgcgctcatcgcctaccagaccgcttaccttaaggcc
cactatcccgtggaattcatggcggcccttctgaacagcgttctcagcaacacggaccaa
gtcgtgaagctcatgaacgagtgccatgacaaggggatcgaggtcctgccgccggacgtc
aatttgagcgatcgggacttcaccgtcgtggaagggaagatccggttcgggctggcggcc
gtcaagaacgtgggggaaagcgccatcgagagcatccttcggagccggaacaacgagggc
gcttttcgatctatttacgatttctgcgagcgggtggacactcagcgggtgaaccgccgg
gtgatcgagcaactcatcaagtgcggtgcgttcgattcgatccacaacagccgggcgagc
accttcgccgccctggacaccgccctggagcgggcgcaggtcgtgcagcgcgaccgccag
tccggccagctcaacatgttcgagctgttgagaaaccggaaacgggctgcgtcgccgccg
ctcccggatgtgcccgcctgggacagccgcaccacgcttcagtacgaaaaagaatccatc
ggcttctatgtctccggccacccgctggaccactacgccgaccagctggccactctctgc
agcgccgacagccaaagggttcgggaaaaaccggagggcacccaggccatcctctgcgga
ctcatctcggtcactaaggagctgaccaccaagcgcggcgagcgcatggcgttcctcacg
ctggaagacaagctgggaaccctggaagtggtcgctttccctgaggttttcagccagtcc
cgggagcttttggaacaagatgagccgaaagtggtcatcggcaccgtgcagcatgatgaa
aagggatccaaggtcatcgccgaaaggattctcacactggaagacgctcaggtggaagcc
gtggaatcggtccggatccatctgaaagcggaacagctgaaccgggacaccatcgaacgc
ctgcggcacctgttgatcagccacgcgggcgaatgtgagacgtttcttcatgtggacgtg
gaacgtgaagcggaagccgtcatcgcgctcaacgcgaagctccgcgtcaaccccacggcg
tccttctttctggagatgggccgtcatttcggagaaggcaccgcggaaccggtgctgcgg
atgtgccggcaataa
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