Desulfoglaeba alkanexedens: FDQ92_09835
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Entry
FDQ92_09835 CDS
T05964
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax03420
Nucleotide excision repair
dax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FDQ92_09835
03430 Mismatch repair
FDQ92_09835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dax03400
]
FDQ92_09835
Enzymes [BR:
dax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FDQ92_09835
DNA repair and recombination proteins [BR:
dax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDQ92_09835
MMR (mismatch excision repair)
Other MMR factors
FDQ92_09835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
AAA_11
ResIII
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QCQ22433
UniProt:
A0A4P8L3Y8
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All DBs
Position
2165862..2167757
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AA seq
631 aa
AA seq
DB search
MLELSEEQRKAVEYVDGPSLVTAGAGSGKTRTLTAKIAHLVNRLGHDPARILAITFTNKA
AGEMKSRLRAVTGRPAEAFPWVRTFHSACFQILKEHCEVLGYQKPLTIHSEYQQKTNLKR
VLGRLDLDPKLLNPMRAAISRAKNSENPWHALDHSFRVPRKREAYELYNELLVQQNAVDF
DDILMLTRDLLRNYGEVREICRGLFDYILIDEFQDSNAIQNEIVDLLLRDGRLTVVGDDY
QSIYRFRGADPVHFIRFPEKFPGAAVFRLEENYRSTEAIVKAAEALIAHNRYRIEKTCFS
RRSGPPVAVRGFTGEDLEAAWVADCCWQYHLYEKIPLDQMAVLYRTRFCSLAFERAFRSS
GIPYQLMGGRGFFERREVQDINAYLVASVNPRDDASFERIVNVPRRGIGSGTLQKIMGYK
AGPLSMQEACRLAFEDGVLPKKTAKELGRLLHLLESLGRERPDRAIRRILEETGYVEYLE
AFAENERDAGERLENIEQMVHAASQKQTIAEYLEDCALLREDQDDADDGHGVRLSTFHAA
KGLEYRVVFVAGVEEGLLPHWRSVTVGTGQEGGALENEAGIEEERRLLYVAMTRASERLH
LSWCRTRRGELVSPSRFLDELPEGLIVREDL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactttcggaagagcagcggaaagcggtggagtacgtggacgggccgtcgctg
gtgacggcgggcgccggaagcggaaagactcgaacccttacggccaagatcgcccacctg
gtgaaccggctcggccatgatccggctcggatcctcgccatcaccttcaccaacaaggcg
gccggcgaaatgaaaagccgcctgcgggcggtcacgggccgaccggccgaagccttcccc
tgggttcgcactttccacagcgcctgttttcagatcctcaaggagcactgcgaggttctg
ggctatcagaagcccctcaccatccactcggaataccagcagaagaccaatctgaagaga
gtgctcggacgactggacctcgatcccaagcttctcaacccgatgcgggcggccatttcc
cgggccaagaattcggaaaatccctggcacgccctggaccattccttccgcgttccgaga
aaacgggaagcttacgaactctataacgaactcctggtacagcagaacgctgtggacttt
gacgacatcctgatgctcacccgggacctgctccgaaactacggcgaagtgcgtgaaatc
tgccggggactcttcgattatatcctgatcgatgagttccaggattccaacgccatccag
aacgaaatcgtcgacctgctcctgagagacggccggctgacggtggtgggcgacgactac
cagagcatataccggtttcgcggcgccgatccggtgcatttcatccgctttccggaaaag
ttccccggggccgcggtgttccgactcgaggagaactaccgctcgaccgaagccatcgtg
aaggctgcggaagccctgatcgctcacaaccggtaccggatcgaaaagacctgcttcagc
cggcgttcgggccctcccgtcgccgtccgaggctttacgggcgaagacctcgaagcggcc
tgggtggccgactgctgctggcaataccatctttacgagaagatccccctggatcagatg
gccgtcctctaccgcacccgcttctgttcgctcgcttttgaacgtgctttccgttcgtcg
gggataccctatcaattgatggggggacggggattcttcgaacggagggaagtgcaggac
atcaacgcctaccttgtcgccagtgtcaatccgagggatgacgcctcattcgaacggatc
gtgaacgtccccaggcggggcattggttccggaacccttcagaagatcatgggctacaag
gcggggccgctttcgatgcaggaggcctgccggctggcctttgaagacggcgttctcccg
aagaagacggcgaaggaactggggcgactcctccatctactggaaagcctcggccgggaa
agacccgatcgggccatccgccggatcctggaagaaaccggctatgtggagtatctggaa
gcctttgcggaaaatgaacgcgatgccggagagcgcctggagaacatcgaacagatggtg
cacgcggcttctcagaaacagaccatcgccgaatacctggaagactgcgccctacttcgg
gaagaccaggacgacgccgacgacggccacggggtgcggctttccaccttccacgccgcc
aagggactggaataccgggtggttttcgttgcgggcgtggaagaggggctgctgcctcac
tggcggtcggtaacggtcgggaccggccaggagggcggggcgctggaaaacgaggcggga
atcgaggaagagcggcgcctgctttacgtggccatgacccgggcttcggagcggctgcac
ctcagctggtgccgcacccggaggggcgaacttgtgagccccagccgcttcctggacgaa
cttccggaaggcttgattgttcgagaagatttgtga
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