Desulfoglaeba alkanexedens: FDQ92_11000
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Entry
FDQ92_11000 CDS
T05964
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FDQ92_11000 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dax03019
]
FDQ92_11000 (groL)
03110 Chaperones and folding catalysts [BR:
dax03110
]
FDQ92_11000 (groL)
03029 Mitochondrial biogenesis [BR:
dax03029
]
FDQ92_11000 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dax04147
]
FDQ92_11000 (groL)
Enzymes [BR:
dax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FDQ92_11000 (groL)
Messenger RNA biogenesis [BR:
dax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FDQ92_11000 (groL)
Chaperones and folding catalysts [BR:
dax03110
]
Heat shock proteins
HSP60 / Chaperonin
FDQ92_11000 (groL)
Mitochondrial biogenesis [BR:
dax03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FDQ92_11000 (groL)
Exosome [BR:
dax04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FDQ92_11000 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FDQ92_11000 (groL)
Exosomal proteins of breast cancer cells
FDQ92_11000 (groL)
Exosomal proteins of colorectal cancer cells
FDQ92_11000 (groL)
Exosomal proteins of bladder cancer cells
FDQ92_11000 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
Motif
Other DBs
NCBI-ProteinID:
QCQ22650
UniProt:
A0A4P8L459
LinkDB
All DBs
Position
2433730..2435364
Genome browser
AA seq
544 aa
AA seq
DB search
MAKQLIYDVKAREALLNGVNILADAVKVTLGPKGRNVVIEKAFGGPTVTKDGVTVAKEIE
LEDKFENMGAQMVKEVASKTSDVAGDGTTTATILAQSIYYEGSKLVTAGANPMALKRGIE
KAVKLVVDELKKISKPTKDQKEIAQVGTISANNDPTIGNIIAEAMNKVGKEGVITVEEAK
GMETTLEVVEGMQFDRGYISPYFVTDPEKMEVVLNEPLILVHEKKISNMKDLLPVLEQIA
KMGRPLLIIAEDVEGEALATLVVNKLRGTLQVCAVKAPGFGDRRKAMLEDIAILTGGQVI
SEEKGIKLESVNLNDLGSAKTVRVDKDNTTIIDGAGDRKALEGRVRQIRTQIEETTSDYD
REKLQERLAKLVGGVAVISVGAATESEMKEKKARVEDALNATRAAVEEGIVPGGGVAYLR
CLGALENLDVDQEEKLGANIIRRALEEPARQIANNAGEEGSVIVQKIKGEKDAFGFNAET
GEFCDLIEAGVIDPTKVTRSALQNAASVAALMLTTECMVADIPKKDEKPEMGGAGGMGGM
GGMY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagttgatctacgatgtgaaagcccgggaagcgctgctgaacggtgtcaat
atcctggcggatgccgtcaaggtgaccctcggacccaagggtcgtaacgtggtcatcgaa
aaggccttcggcggcccgactgtgaccaaggacggcgtcacggtggccaaggagatcgaa
ctcgaagacaagttcgaaaacatgggcgcccagatggtcaaggaagtcgccagcaagacc
agcgacgtggccggcgacggaacaaccaccgccaccatcctggcccagtccatctattat
gaagggtccaagctggtgaccgcgggcgccaatcccatggccctcaagcgggggatcgaa
aaggccgtcaagctggtggtcgacgagctgaagaagatcagcaagcccaccaaggaccag
aaagagatcgctcaggtcgggaccatttccgccaacaacgatcccaccatcggcaacatc
atcgccgaggccatgaacaaggtgggcaaggaaggtgtcatcacggtggaagaggccaag
gggatggaaacgaccctggaagtggtcgaagggatgcagttcgaccgcggctacatttcg
ccgtactttgtgaccgaccccgaaaagatggaagtggtcctgaacgaacccctcattctt
gtgcacgaaaagaagatcagcaacatgaaggatcttctgccggttctggaacagatcgcc
aagatggggcggccccttctgatcatcgccgaagacgtggaaggcgaggcgctcgccacc
ctggtggtcaacaagctgcgcggcaccctccaggtctgcgccgtgaaggctccgggcttc
ggtgaccgccgaaaggccatgcttgaagacatcgccatcctcaccggcggccaggtcatc
agcgaagaaaaggggatcaagctcgaaagcgtgaacctgaacgatctgggaagcgccaag
accgtgcgcgtggacaaggacaacaccaccatcatcgacggcgccggagaccggaaggct
ctggagggccgggtgcgccagattcggacccagatcgaggagaccacgagcgactacgat
cgtgaaaagctccaagaacggctggccaagctggtgggcggcgtggcggtcatcagcgtg
ggcgctgcgacggaatccgaaatgaaggaaaagaaggcccgggtggaagacgcgctcaat
gcgacgcgggccgctgtggaagaaggcatcgttcctggcggcggtgtcgcctatctgcgc
tgcctgggtgccctggaaaacctcgacgtggatcaggaagaaaaactgggcgccaatatc
atccgccgggctctggaagaacccgcccgccagattgccaataacgccggcgaagaaggt
tccgtgatcgtccagaagatcaagggcgaaaaggatgccttcggtttcaacgccgaaacc
ggcgaattctgcgacttgatcgaagccggggtcatcgaccccaccaaggtgacccgttcc
gcgctccagaacgccgccagcgtggccgctctcatgctcaccaccgaatgcatggtggcc
gatattcccaagaaggacgagaagcctgaaatgggcggtgccggcggcatgggcggcatg
ggcggcatgtactaa
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