Desulfoglaeba alkanexedens: FDQ92_11450
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Entry
FDQ92_11450 CDS
T05964
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FDQ92_11450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dax03019
]
FDQ92_11450
Enzymes [BR:
dax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FDQ92_11450
Messenger RNA biogenesis [BR:
dax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FDQ92_11450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QCQ23547
UniProt:
A0A4P8L652
LinkDB
All DBs
Position
2535386..2536735
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AA seq
449 aa
AA seq
DB search
MNLREEILKGLRDAGFERCTPIQDKTLPLTLSGRDVAAQAQTGSGKTAVFVLTILQRLLS
QPGLEGHKSRALIVAPTRELALQIHEDARLLGRYCPFTTAVIYGGVGYEKQIEKLRQGAD
MVVATPGRLIDLMKQGIFKPDDVSFLVIDEADRMFDMGFVKDLRYIMRRLPPYNRRQSML
FSATLSPRVLELTYEFMNAPEEVVINPEELVVGTVEQTLYHVGRAEKFSLLLGLLKREAA
ERVLIFTNTKIQAARLADRLHACGYEATAITGDLPQKNRVKILGKFKDGSVTILVATDVA
SRGIHVEDISHVINYDVPQDPEEYIHRIGRTARAGKRGRAITLASEDDVYHLEAVEKLLG
EKIPVVWPEEDWFVKEPPRKRERAPRPGKPKPRQGKSPKGTATGEAARGKTPPGAGAKGE
PKRRRRPKRSSKPGEPRRDERRKSQETVE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ctgaaccttcgggaggaaatcctcaaggggctccgggacgccgggttcgaacgctgcacg
cccatccaggacaagacgctcccgctgacgctcagcggccgcgacgtggcagcccaggcc
cagacgggctcgggcaagacggcggtctttgtcctcaccatccttcagcggctcctttcc
cagcccggcctggaaggtcacaaatcccgggcgctcatcgtggcccccacccgggaactg
gcgctgcagattcacgaagacgcccggctgctcggccgctactgcccgttcaccacagcg
gtgatctacggcggggtgggctacgagaagcagatcgaaaaactgcggcagggagccgac
atggtcgtcgccacccccgggcgcctcatcgacctcatgaaacaggggattttcaaaccc
gatgacgtgtcctttctggtgatcgatgaagccgaccggatgttcgacatgggttttgtc
aaggacctccgctacatcatgcggcgcctgccgccctacaaccgccggcagagtatgctc
ttttccgcgacgctttccccccgagtcctggaactcacctatgaattcatgaacgctccg
gaggaggtggtcatcaaccccgaggagctggtggtcggcacggtggagcagaccctgtac
catgtgggaagagccgagaagttttcgctgctcctcggattgctcaaacgtgaggcggcc
gagcgggtgctgattttcaccaacacgaagattcaagccgctaggctggccgaccgtctc
catgcctgcggttacgaggccacggccatcacgggggacctgccccagaaaaaccgggtg
aagatcctggggaagttcaaggacggaagcgtgaccatcctggtggccaccgacgtggct
tcacggggcattcacgtggaagacatatcccatgtgatcaactacgacgttccccaggac
ccggaagagtacattcaccgcatcgggcggaccgccagggccggaaagagggggcgggcc
atcaccctggcgtccgaggacgatgtttatcacctggaagcggtggaaaagctcctgggc
gaaaagattcccgtggtctggcccgaggaggactggttcgtgaaagagcctcccaggaaa
cgggaacgtgcgcctcggcctggaaaacccaagccaaggcagggaaagtctcccaaggga
accgcgaccggggaagccgccaggggtaagactcctcccggtgccggcgccaagggtgag
cccaaaaggaggcggcggcccaaacgatcgtccaagcccggggagccgcgccgggacgag
cgccggaagtcccaggagaccgtcgaatag
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