Desulfoglaeba alkanexedens: FDQ92_11930
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Entry
FDQ92_11930 CDS
T05964
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dax
Desulfoglaeba alkanexedens
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dax01011
]
FDQ92_11930
Enzymes [BR:
dax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FDQ92_11930
Peptidoglycan biosynthesis and degradation proteins [BR:
dax01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FDQ92_11930
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
SLT_2
HTH_Tnp_ISL3
LysM3_LYK4_5
NMB0315_dom_I
LysM_RLK
DUF3071
Motif
Other DBs
NCBI-ProteinID:
QCQ22820
UniProt:
A0A4P8L4K9
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Position
2644793..2646091
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AA seq
432 aa
AA seq
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MDPMLRRPRGRKSLTFSVKWRSARELPGRLPLWPGGFMEAAASRGNSPGEFTKDWTTAMN
GAFQRLMVVGFAVLCLGSGPVACASENRTAQAQAPSEPSAPAEPAVWVPFIPTPTEMDLC
GEAVPLGDEEVWERFDREFTIVVYSHAQVYLWLKRAERFFPWFEDELERRGLPRDLKYVA
VAESDLQHTAASPMGAVGIWQFIPATGNRYGLNAKGVIDERYDFEKATGSALNYLKDLHD
MFGNWALAIAAYNCGEGRVRQELAQQKVRDYYSLKLPLETERYVFRILAIKAVLSDPARY
GYALPAGAGYKMPDVETVSVRFPATVPIQAVADLAGITYREFKRLNPSFRSSDIPSGTYL
LRFPKGRGDRVAEGAEALAERFKPRAVVHTVRSGDTLSGIARRYGVTTDEIKRWNGLRSN
IIRTGQRLQIQR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatccgatgctccggagaccgcgaggacggaaatcgcttactttttcagtgaaatgg
agatctgcgcgtgaacttcccggccggctgccgctttggcccgggggtttcatggaggct
gcggcttcccggggaaacagccctggagagtttacaaaggattggacgacggcgatgaac
ggcgcgtttcagagactgatggttgtaggctttgcggtcttatgccttggatcgggcccg
gttgcttgcgcttcggaaaatcggacggcccaagcgcaggctccttccgaaccctccgct
cccgccgagccggctgtgtgggtccccttcattcccaccccgaccgaaatggacctgtgc
ggtgaagcggttccactgggagatgaagaggtctgggaacggtttgatcgtgaatttact
atcgtggtttattctcacgcgcaggtctacctttggctcaagcgggcggagcgcttcttc
ccctggttcgaagatgaactggagcgccgcgggctgcctcgggacctcaaatacgtggcc
gtcgccgaaagcgatctccagcataccgcggcgtcccccatgggggccgtggggatttgg
cagttcatccccgctacggggaaccgctacgggctcaacgccaaaggtgttatcgacgaa
cgctacgacttcgaaaaggccaccggcagcgccctcaactacctgaaggacctccacgac
atgttcggaaactgggcgcttgccatcgcggcttacaactgcggggaaggccgcgtaagg
caggaactggcccaacagaaagtccgcgactattacagtctgaagctgcctctggagacg
gaacgatacgttttccgaatactggccatcaaggcggttttgagcgatcccgcccgctat
gggtatgctctgccggcgggagccgggtacaagatgcccgatgtggaaacggtgtccgtc
cggtttccggctaccgttcccatccaggccgtggccgatctcgcgggaatcacctatcgt
gagttcaaacgcctcaacccctcgtttcgttccagcgatatcccttcgggcacctacctg
ctgaggttcccgaagggccgcggggaccgggttgcggagggagcggaggcgctggccgaa
cggttcaagcctcgggccgttgtccacaccgtccgcagcggtgacacgctgagcgggatc
gcccgccgctatggggttaccactgacgagatcaagcggtggaacggcctgaggagcaac
atcatccggaccggccagcggttgcagatacagcgctga
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