Desulfoglaeba alkanexedens: FDQ92_12990
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Entry
FDQ92_12990 CDS
T05964
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
dax
Desulfoglaeba alkanexedens
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dax01002
]
FDQ92_12990
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dax01011
]
FDQ92_12990
Peptidases and inhibitors [BR:
dax01002
]
Cysteine peptidases
Family C82
FDQ92_12990
Peptidoglycan biosynthesis and degradation proteins [BR:
dax01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FDQ92_12990
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QCQ23006
UniProt:
A0A4P8L4S2
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Position
2868221..2869918
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AA seq
565 aa
AA seq
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MPQGPVAVRLIRLYTRLAVFLSILSLPCWMDLVTAVADAATARAVQEILGQSAEPRPLYI
ACQKIHVGEDLIRFYADRSFAPAWTDANGLNDLGDELPVHLSGARDHGLDPEDYHLGCIE
ALADDIRRRSQKGGPPDVVRLASIDILMSDAFLIFASHLACGKVDPEKFHPLWLSPKHKT
DILAELKRLLEHRDLRHALGRFAPPHPEYRRLVQAGRELRAVVVGSSWPEVPPGPTLHPG
DTSRRVVVLRERLARSGDLPAGEAPVAAAEFFDPFLEEAVRRFQKRHGLAVDGVVGPRTL
ASLNVPPETRLRQILVNLERWRWLPRHLGDRYILVNVAGFSLEAYRSGEKVLTMRVIVGK
SYQRTPVFSEKMRYIEVNPYWNVPSSIAVKEYLPKIRKDPGFLKANHMELLSGWGPSSRV
LDPRAIDWSRVTQDNFPGRIRQLPGPWNALGRIKFMFPNAFNVYLHDTPERHLFVRPRRA
LSHGCIRVENPVDLALFVLQNDTSWTREQVKSLIDSGERHVIPLPHPVMVHLLYWTAWVD
EAGVIHFREDIYGRDEILSDALGLS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaggtcctgtcgccgtgcgcctcattcgcctgtatacacgtctcgccgtcttt
ctgtcgatcctttccctgccgtgctggatggacctcgtaacggccgtcgccgacgcggct
acggcgcgggccgtccaggagatcctcggccaatccgcggagccgagacccctgtacatc
gcctgccagaaaatccatgtgggtgaagacctcatccgcttttacgcagaccggagcttc
gctcccgcctggacggatgcaaacggcctgaatgacctgggcgacgagcttcccgtgcac
ctttccggcgctcgggaccacgggctcgaccccgaggattatcacctgggctgcatcgaa
gccctggcggacgacatccgccggagatcgcaaaagggcgggccccctgatgtggtccgg
ctcgcgtccatcgatattctcatgtccgatgcgttcctgatctttgcttcccacctggcc
tgcggcaaagtggacccggagaagttccaccccctctggctctcgcccaaacacaagacg
gatatcctcgccgagcttaaacgcctcttggaacaccgcgacctccgccacgctttgggt
cgcttcgcaccgcctcacccggaataccggcgcctggtccaggcgggccgggagctgagg
gccgtggtcgtggggagttcatggccggaggttccaccggggccgaccctgcacccgggc
gatacgagccgccgagtggtcgtacttcgagagcggctggcgcgaagcggcgacctgccg
gcaggggaggcgccggtggcggccgctgagtttttcgacccgttcctggaagaagcggtc
aggcggtttcagaaacgccacggcttggccgtggacggcgtggtggggccgcggaccctg
gcatccttgaacgttcctcccgaaaccaggctccggcagatcctcgtgaacctcgaaagg
tggcgctggcttccccggcacttgggagaccgctacatcctggtgaacgtggcgggattt
tcgctggaagcttaccgctccggggaaaaggtcctgaccatgcgggtcatcgtggggaag
agttaccagcggacccccgttttcagcgaaaagatgcgctacatcgaggtgaatccgtac
tggaacgtaccgtcgagcatcgccgtcaaggagtatctcccgaaaattcggaaagatccg
ggcttcctgaaagccaatcacatggaactgctgtcaggttggggcccgtccagccgggtc
ctggatccgcgggcgatcgactggagccgcgtcactcaagacaattttcccggccgtatc
cgccagcttcccggcccctggaacgccctcgggcggatcaagttcatgtttcccaacgcc
ttcaacgtttacctgcacgatacgccggagcgccaccttttcgtccggcctcggcgggcg
ctgagccatggctgcatccgagtcgaaaaccccgtcgatctcgctcttttcgtgctgcaa
aacgatacttcctggacgcgcgaacaggtgaaatcgctgatcgattcgggggaaaggcac
gtgattccgctgccgcatcccgtcatggtccatctgctctactggacagcctgggtggat
gaagcgggggtgatccatttcagagaagacatttacgggcgggacgaaatcctgagcgac
gcgctggggttgtcctga
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